Job Description P0A6J8 Confidence 100.00% Date Thu Jan 5 11:03:18 GMT 2012 Rank 45 Aligned Residues 267 % Identity 18% Template c2pn1A_ PDB info PDB header:ligase Chain: A: PDB Molecule:carbamoylphosphate synthase large subunit; PDBTitle: crystal structure of carbamoylphosphate synthase large subunit (split2 gene in mj) (zp_00538348.1) from exiguobacterium sp. 255-15 at 2.00 a3 resolution Resolution 2.00 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.			.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
Predicted Secondary structure																																					.	.
Query SS confidence																																					.	.
Query Sequence		M	E	K	L	R	V	G	I	V	F	G	G	K	S	A	E	H	E	V	S	L	Q	S	A	K	N	I	V	D	A	I	D	K	S	R	.	.	F	D	V	V	L	L	G	I	D	K	Q	G	Q	W	H	V	S	D	A	S	N	Y	L	L	N	A	D	D	P	A	H	I	A	L	R	P	S	A	T	S	L	A	Q
Query Conservation																																					.	.
Alig confidence																	.	.	.	.	.	.	.	.	.	.											.	.																																							.	.	.	.	.
Template Conservation																	.	.	.	.	.	.	.	.	.	.																																																			.	.	.	.	.
Template Sequence		X	Q	K	P	H	L	L	I	T	S	A	G	R	R	A	.	.	.	.	.	.	.	.	.	.	K	L	V	E	Y	F	V	K	E	F	K	T	G	R	V	S	T	A	D	C	S	P	L	A	S	A	L	Y	X	A	D	Q	H	Y	I	V	P	K	I	D	E	V	E	Y	I	D	H	L	L	T	.	.	.	.	.
Template Known Secondary structure		T	T								S		T	T			.	.	.	.	.	.	.	.	.	.												S	S							S		T	T		G	G	G	G	G	S	S	S							T	T	S	T	T								.	.	.	.	.
Template Predicted Secondary structure																	.	.	.	.	.	.	.	.	.	.																																																			.	.	.	.	.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.											.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	P	G	K	H	E	H	Q	L	I	D	A	Q	N	G	Q	P	L	P	T	V	D	V	I	F	P	I	V	H	G	T	L	G	E	D	G	S	L	Q	G	M	L	R	V	A	N	L	P	F	V	G	S	D	V	L	A	S	A	A	C	M	D	K	D	V	T	K	R	L	L	R	D	A	G	L	N	I	A	P	F
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	C	Q	D	E	G	V	T	A	L	L	T	L	I	D	P	E	L	G	L	L	A	Q	A	T	E	R	F	Q	A	I	G	V	T	V	I	V	S	P	Y	A	A	C	E	L	C	F	D	K	Y	T	X	Y	E	Y	C	L	R	Q	G	I	A	H	A	R	T
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.						T							S	S										T						T	T	T																B												T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
																66	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.		.
Predicted Secondary structure																																																																																.
Query SS confidence																																																																																.
Query Sequence		I	T	L	T	R	A	N	R	H	N	I	S	F	A	E	V	E	S	K	L	G	L	P	L	F	V	K	P	A	N	Q	G	S	S	V	G	V	S	K	V	T	S	E	E	Q	Y	A	I	A	V	D	L	A	F	E	F	D	H	K	V	I	V	E	Q	G	I	K	G	R	E	I	E	C	A	V	L	G	N	.	D
Query Conservation																																																																																.
Alig confidence										.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.
Template Conservation										.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		Y	A	T	X	A	S	F	E	.	.	.	.	E	A	L	A	A	G	E	V	Q	L	P	V	F	V	K	P	R	N	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	L	I	V	Q	E	L	L	V	G	Q	E	L	G	V	D	A	Y	V	D	L	I
Template Known Secondary structure			S	S						.	.	.	.					T	T	S	S		S							S	B		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										S											T	T
Template Predicted Secondary structure										.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		132	.	.	.	.	.	.	.					140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.																												.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180
		238	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	P	Q	A	S	T	C	G	E	I	V	L	T	S	D	F	Y	A	Y	D	T	K	Y	I	D	E	D	G	A	K	V	V	V	P	A	A	I	A	P	E	I	N	D	K	I	R	A	I	A	V	Q	A	Y	Q	T	L	G	C	A	G	M	A	R	V	D	V	F	L	T	P	E	N	E	V	V	I	N	E	I	N
Query Conservation
Alig confidence																.	.	.	.	.	.	.	.	.															.	.	.	.	.																												.
Template Conservation																.	.	.	.	.	.	.	.	.															.	.	.	.	.																												.
Template Sequence		S	G	K	V	T	S	I	F	I	K	E	K	L	T	.	.	.	.	.	.	.	.	.	X	R	A	G	E	T	D	K	S	R	S	V	L	R	.	.	.	.	.	D	D	V	F	E	L	V	E	H	V	L	D	G	S	G	L	V	G	P	L	D	F	D	L	F	D	V	.	A	G	T	L	Y	L	S	E	I	N
Template Known Secondary structure		T														.	.	.	.	.	.	.	.	.			T	T											.	.	.	.	.												T	T	T														.	T	T
Template Predicted Secondary structure																.	.	.	.	.	.	.	.	.															.	.	.	.	.																												.
Template SS confidence
		204	.	.	.	.	.	210	.	.	.	.	.	.	.										.	.	220	.	.	.	.	.	.	.	.	.	230	.						.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.		.	260	.	.	.	.	.	.	.	.
		318	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	L	P	G	F	T	N	I	S	M	Y	P	K	L	W	Q	A	S	G	L	G	Y	T	D	L	I	T	R	L	I
Query Conservation
Alig confidence								.	.	.	.	.
Template Conservation								.	.	.	.	.
Template Sequence		P	R	F	G	G	G	.	.	.	.	.	Y	P	H	A	Y	E	C	G	V	N	F	P	A	Q	L	Y	R	N	L
Template Known Secondary structure		S	S			T	T	.	.	.	.	.							T	T
Template Predicted Secondary structure								.	.	.	.	.
Template SS confidence
		269	270	.	.	.	.						.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions