Job Description P0A6J8 Confidence 100.00% Date Thu Jan 5 11:03:18 GMT 2012 Rank 38 Aligned Residues 296 % Identity 15% Template c2ip4A_ PDB info PDB header:ligase Chain: A: PDB Molecule:phosphoribosylamine--glycine ligase; PDBTitle: crystal structure of glycinamide ribonucleotide synthetase from2 thermus thermophilus hb8 Resolution 2.80 Å

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		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.			.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
Predicted Secondary structure																															.	.
Query SS confidence																															.	.
Query Sequence		R	V	G	I	V	F	G	G	K	S	A	E	H	E	V	S	L	Q	S	A	K	N	I	V	D	A	I	D	K	.	.	S	R	F	D	V	V	L	L	G	I	D	K	Q	G	Q	W	H	V	S	D	A	S	N	Y	L	L	N	A	D	D	P	A	H	I	A	L	R	P	S	A	T	S	L	A	Q	V	P	G	K
Query Conservation																															.	.
Alig confidence										.	.	.	.	.	.	.	.	.													.	.																				.	.	.	.															.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation										.	.	.	.	.	.	.	.	.																																		.	.	.	.															.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		K	V	L	V	V	G	S	G	.	.	.	.	.	.	.	.	.	G	R	E	H	A	L	L	W	K	A	A	Q	S	P	R	V	K	R	L	Y	A	A	P	G	N	A	G	X	E	A	L	A	E	.	.	.	.	L	V	P	W	N	G	D	V	E	A	L	A	D	W	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure								S	S	.	.	.	.	.	.	.	.	.												T		S	S											T	T	G	G	G	T	S		.	.	.	.						S									.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure										.	.	.	.	.	.	.	.	.																																		.	.	.	.															.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		2	.	.	.	.	.	.	.										10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.					.	.	.	.	.	.	.	50	.	.	.	.	.	.
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	E	H	Q	L	I	D	A	Q	N	G	Q	P	L	P	T	V	D	V	I	F	P	I	V	H	G	T	L	G	E	D	G	S	L	Q	G	M	L	R	V	A	N	L	P	F	V	G	S	D	V	L	A	S	A	A	C	M	D	K	D	V	T	K	R	L	L	R	D	A	G	L	N	I	A	P	F	I	T	L	T
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.												.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.												.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	A	L	A	E	G	I	D	L	T	L	V	.	.	G	P	E	A	P	L	V	E	G	I	A	D	A	F	Q	A	R	G	L	L	L	F	G	P	T	Q	K	A	A	X	I	E	G	S	K	A	F	A	K	G	L	X	E	R	Y	G	I	P	T	A	R	Y	R	V	F	R
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.					T							.	.		S	S					T	T									T					S																						T				B							S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.												.	.
Template SS confidence
													57	.	.	60	.	.	.	.	.	.	.			.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.
		163	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.			.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
Predicted Secondary structure																																																						.	.
Query SS confidence																																																						.	.
Query Sequence		R	A	N	R	H	N	I	S	F	A	E	V	E	S	K	L	G	L	P	L	F	V	K	P	A	N	Q	G	S	S	V	G	V	S	K	V	T	S	E	E	Q	Y	A	I	A	V	D	L	A	F	E	F	.	.	D	H	K	V	I	V	E	Q	G	I	K	G	R	E	I	E	C	A	V	L	G	N	D	N	P	Q
Query Conservation																																																						.	.
Alig confidence						.	.	.	.																																													.	.
Template Conservation						.	.	.	.
Template Sequence		E	P	L	E	.	.	.	.	A	L	A	Y	L	E	E	V	G	V	P	V	V	V	K	D	S	G	L	A	A	G	K	G	V	T	V	A	F	D	L	H	Q	A	K	Q	A	V	A	N	I	L	N	R	A	E	G	G	E	V	V	V	E	E	Y	L	E	G	E	E	A	T	V	L	A	L	T	D	G	E	T	I
Template Known Secondary structure		S				.	.	.	.										S	S						T	T	S		S	S	T	T					S													T	T	S	S	S												S										S	S	S
Template Predicted Secondary structure						.	.	.	.
Template SS confidence
		124	.	.	.					.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.
		241	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.		.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.						.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.
Predicted Secondary structure																																			.																				.	.	.	.	.
Query SS confidence																																			.																				.	.	.	.	.
Query Sequence		A	S	T	C	G	E	I	V	L	T	S	D	F	Y	A	Y	D	T	K	Y	I	D	E	D	G	A	K	V	V	V	P	A	A	.	I	A	P	E	I	N	D	K	I	R	A	I	A	V	Q	A	Y	Q	T	.	.	.	.	.	L	G	C	A	G	M	A	R	V	D	V	F	L	T	P	E	N	E	V	V	I	N
Query Conservation																																			.																				.	.	.	.	.
Alig confidence															.	.																			.																				.	.	.	.	.																		.
Template Conservation															.	.																																																													.
Template Sequence		L	P	L	L	P	S	Q	D	H	K	R	L	L	.	.	D	G	D	Q	G	P	X	T	G	G	X	G	A	V	A	P	Y	P	X	D	E	A	T	L	R	R	V	E	E	E	I	L	G	P	L	V	R	G	L	R	A	E	G	V	V	Y	R	G	V	V	Y	A	G	L	X	L	T	R	E	G	.	P	K	V	L
Template Known Secondary structure							B								.	.	T	T	T						S		S					S															T											T	T															S	S		.
Template Predicted Secondary structure															.	.																																																													.
Template SS confidence
		200	.	.	.	.	.	.	.	.	.	210	.	.			.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.		.	.	.	.
		315	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	I	N	T	L	P	G	F	T	N	I	S	M	Y	P	K	L	W	Q	A	S	G	L	G	Y	T	D	L	I	T	R	L	I	E
Query Conservation
Alig confidence									.	.	.
Template Conservation									.	.	.
Template Sequence		E	F	N	A	R	F	G	.	.	.	D	P	E	A	Q	A	L	L	P	L	L	E	N	D	L	V	E	L	A	L	R	V	A	E
Template Known Secondary structure					S	S			.	.	.	T	T						T	T	T	B		S
Template Predicted Secondary structure									.	.	.
Template SS confidence
		277	.	.	280	.	.	.				.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions