Job Description P0A6J8 Confidence 94.41% Date Thu Jan 5 11:03:18 GMT 2012 Rank 103 Aligned Residues 45 % Identity 20% Template c2hkoA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:lysine-specific histone demethylase 1; PDBTitle: crystal structure of lsd1 Resolution 2.80 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	E	K	L	R	V	G	I	V	F	G	G	K	S	A	E	H	E	V	S	L	Q	S	A	K	N	I	V	D	A	I	D	K	S	R	F	D	V	V	L	L	G	I	D	K	Q	G	Q	W	H	V	S	D	A
Query Conservation
Alig confidence														.	.	.	.	.	.	.	.	.
Template Conservation														.	.	.	.	.	.	.	.	.
Template Sequence		K	K	T	G	K	V	I	I	I	G	S	G	.	.	.	.	.	.	.	.	.	V	S	G	L	A	A	A	R	Q	L	Q	S	F	G	M	D	V	T	L	L	E	A	R	D	R	V	G	G	R	V	A	T	F
Template Known Secondary structure		S		S									B	.	.	.	.	.	.	.	.	.													T	T								S	S	S	S	S	B	S	S
Template Predicted Secondary structure														.	.	.	.	.	.	.	.	.
Template SS confidence
		276	.	.	.	280	.	.	.	.	.	.	.										.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions