Phyre 2 alignment of P0A6J8 with c2gpwC

Job Description P0A6J8
Confidence 100.00% Date Thu Jan 5 11:03:18 GMT 2012

Rank 29 Aligned Residues 304

% Identity 17% Template c2gpwC_

PDB info PDB header:ligase Chain: C: PDB Molecule:biotin carboxylase; PDBTitle: crystal structure of the biotin carboxylase subunit, f363a2 mutant, of acetyl-coa carboxylase from escherichia coli.

Resolution 2.20 Å

	Insertion relative to template
	Deletion relative to template
	Catalytic residue from the CSA

Detailed help on interpreting your alignment

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure
Query SS confidence
Query Sequence	M	E	K	L	R	V	G	I	V	F	G	G	K	S	A	E	H	E	V	S	L	Q	S	A	K	N	I	V	D	A	I	D	K	S	R	F	D	V	V	L	L	G	I	D	K	Q	G	Q	W	H	V	S	D	A	S	N	Y	L	L	N	A	D	D	P	A	H	I	A	L	R	P	S	A	T	S	L	A	Q	V	P
Query Conservation
Alig confidence					.								.	.	.	.	.	.	.	.	.
Template Conservation					.								.	.	.	.	.	.	.	.	.
Template Sequence	M	L	D	K	.	I	V	I	A	N	R	G	.	.	.	.	.	.	.	.	.	E	I	A	L	R	I	L	R	A	C	K	E	L	G	I	K	T	V	A	V	H	S	S	A	D	R	D	L	K	H	V	L	L	A	D	E	T	V	C	I	G	P	A	P	S	V	K	S	Y	L	N	I	P	A	I	I	S	A	A
Template Known Secondary structure	S	S			.								.	.	.	.	.	.	.	.	.													T	T									G	G	G	T	T							S	S						S	S	S	S	G	G	G	T	T	T
Template Predicted Secondary structure					.								.	.	.	.	.	.	.	.	.
Template SS confidence
	1	.	.	.		.	.	.	.	.	10	.										.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70

	81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
Predicted Secondary structure
Query SS confidence
Query Sequence	G	K	H	E	H	Q	L	I	D	A	Q	N	G	Q	P	L	P	T	V	D	V	I	F	P	I	V	H	G	T	L	G	E	D	G	S	L	Q	G	M	L	R	V	A	N	L	P	F	V	G	S	D	V	L	A	S	A	A	C	M	D	K	D	V	T	K	R	L	L	R	D	A	G	L	N	I	A	P	F	I	T
Query Conservation
Alig confidence					.	.	.	.	.	.	.	.	.	.	.	.	.	.								.
Template Conservation					.	.	.	.	.	.	.	.	.	.	.	.	.	.								.
Template Sequence	E	I	T	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	V	A	I	H	P	G	.	Y	G	F	L	S	E	N	A	N	F	A	E	Q	V	E	R	S	G	F	I	F	I	G	P	K	A	E	T	I	R	L	M	G	D	K	V	S	A	I	A	A	M	K	K	A	G	V	P	C	V	P	G	S	D
Template Known Secondary structure				T	.	.	.	.	.	.	.	.	.	.	.	.	.	.								.	S	S	T	T	T	T											T	T				S	S	S										S												T			B			B		S
Template Predicted Secondary structure					.	.	.	.	.	.	.	.	.	.	.	.	.	.								.
Template SS confidence
	71	.	.	.															.	.	.	.	.	80	.		.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.

	161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.							.	.	.	.	.	220	.	.	.	.	.	.		.	.	.	230	.	.	.
Predicted Secondary structure																																																							.	.	.	.	.	.													.
Query SS confidence																																																							.	.	.	.	.	.													.
Query Sequence	L	T	R	A	N	R	H	N	I	S	F	A	E	V	E	S	K	L	G	L	P	L	F	V	K	P	A	N	Q	G	S	S	V	G	V	S	K	V	T	S	E	E	Q	Y	A	I	A	V	D	L	A	F	E	F	.	.	.	.	.	.	D	H	K	V	I	V	E	Q	G	I	K	G	.	R	E	I	E	C	A	V
Query Conservation																																																							.	.	.	.	.	.													.
Alig confidence							.																				.	.	.	.	.																								.	.	.	.	.	.													.
Template Conservation							.																				.	.	.	.	.
Template Sequence	G	P	L	G	D	D	.	M	D	K	N	R	A	I	A	K	R	I	G	Y	P	V	I	I	K	A	.	.	.	.	.	S	G	G	M	R	V	V	R	G	D	A	E	L	A	Q	S	I	S	M	T	R	A	E	A	K	A	A	F	S	N	D	M	V	Y	M	E	K	Y	L	E	N	P	R	H	V	E	I	Q	V
Template Known Secondary structure	S				S		.													S	S						.	.	.	.	.									S	G	G	G																	S												S
Template Predicted Secondary structure							.																				.	.	.	.	.
Template SS confidence
	136	.	.	.	140	.		.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160						.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.

	234	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.		.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.
Predicted Secondary structure																																								.
Query SS confidence																																								.
Query Sequence	L	G	N	D	N	P	Q	A	S	T	C	G	E	I	V	L	T	S	D	F	Y	A	Y	D	T	K	Y	I	D	E	D	G	A	K	V	V	V	P	A	.	A	I	A	P	E	I	N	D	K	I	R	A	I	A	V	Q	A	Y	Q	T	L	G	C	A	G	M	A	R	V	D	V	F	L	T	P	E	N	E	V	V
Query Conservation																																								.
Alig confidence																				.	.	.	.	.	.	.	.													.																																						.
Template Conservation																				.	.	.	.	.	.	.	.																																																			.
Template Sequence	L	A	D	G	Q	G	N	A	I	Y	L	A	E	R	D	C	S	M	Q	.	.	.	.	.	.	.	.	R	R	H	Q	K	V	V	E	E	A	P	A	P	G	I	T	P	E	L	R	R	Y	I	G	E	R	C	A	K	A	C	V	D	I	G	Y	R	G	A	G	T	F	E	F	L	F	E	N	G	E	.	F	Y
Template Known Secondary structure				S	S	S														.	.	.	.	.	.	.	.		T	T								S		T	T																					T													T	T		.
Template Predicted Secondary structure																				.	.	.	.	.	.	.	.																																																			.
Template SS confidence
	215	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.									.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.		.	.

	313	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.
Predicted Secondary structure
Query SS confidence
Query Sequence	I	N	E	I	N	T	L	P	G	F	T	N	I	S	M	Y	P	K	L	W	Q	A	S	G	L	G	Y	T	D	L	I	T	R	L	I	E	L	A	L
Query Conservation
Alig confidence														.	.	.	.														.	.	.
Template Conservation														.	.	.	.														.	.	.
Template Sequence	F	I	E	M	N	T	R	I	Q	V	E	H	P	.	.	.	.	V	T	E	M	I	T	G	V	D	L	I	K	E	.	.	.	Q	L	R	I	A	A
Template Known Secondary structure						S	S			T	T			.	.	.	.														.	.	.						T
Template Predicted Secondary structure														.	.	.	.														.	.	.
Template SS confidence
	286	.	.	.	290	.	.	.	.	.	.	.	.					.	300	.	.	.	.	.	.	.	.	.	310	.				.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server

Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]

© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys
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