Job Description P0A6J8 Confidence 100.00% Date Thu Jan 5 11:03:18 GMT 2012 Rank 17 Aligned Residues 304 % Identity 17% Template c2dzdB_ PDB info PDB header:ligase Chain: B: PDB Molecule:pyruvate carboxylase; PDBTitle: crystal structure of the biotin carboxylase domain of2 pyruvate carboxylase Resolution 2.40 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.		.	.	.	.	.	.	.
Predicted Secondary structure																																																																										.
Query SS confidence																																																																										.
Query Sequence		M	E	K	L	R	V	G	I	V	F	G	G	K	S	A	E	H	E	V	S	L	Q	S	A	K	N	I	V	D	A	I	D	K	S	R	F	D	V	V	L	L	G	I	D	K	Q	G	Q	W	H	V	S	D	A	S	N	Y	L	L	N	A	D	D	P	A	H	I	A	L	R	P	S	.	A	T	S	L	A	Q	V
Query Conservation																																																																										.
Alig confidence					.	.								.	.	.	.	.	.	.	.	.																																																				.
Template Conservation					.	.								.	.	.	.	.	.	.	.	.
Template Sequence		I	R	K	.	.	V	L	V	A	N	R	G	.	.	.	.	.	.	.	.	.	E	I	A	I	R	V	F	R	A	C	T	E	L	G	I	R	T	V	A	I	Y	S	K	E	D	V	G	S	Y	H	R	Y	K	A	D	E	A	Y	L	V	G	E	G	K	K	P	I	E	A	Y	L	D	I	E	G	I	I	E	I
Template Known Secondary structure			S		.	.								.	.	.	.	.	.	.	.	.													T	T									G	G	G	G	G		G	G	G	G	G	S	S						S	T	T	S						T	T
Template Predicted Secondary structure					.	.								.	.	.	.	.	.	.	.	.
Template SS confidence
		6	.	.			.	10	.	.	.	.	.										.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	G	K	H	E	H	Q	L	I	D	A	Q	N	G	Q	P	L	P	T	V	D	V	I	F	P	I	V	H	G	T	L	G	E	D	G	S	L	Q	G	M	L	R	V	A	N	L	P	F	V	G	S	D	V	L	A	S	A	A	C	M	D	K	D	V	T	K	R	L	L	R	D	A	G	L	N	I	A	P	F	I
Query Conservation
Alig confidence							.	.	.	.	.	.	.	.	.	.	.	.	.	.													.
Template Conservation							.	.	.	.	.	.	.	.	.	.	.	.	.	.													.
Template Sequence		A	K	A	H	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	D	A	I	H	P	G	Y	G	F	L	S	.	E	N	I	Q	F	A	K	R	C	R	E	E	G	I	I	F	I	G	P	N	E	N	H	L	D	M	F	G	D	K	V	K	A	R	H	A	A	V	N	A	G	I	P	V	I	P	G	S
Template Known Secondary structure					T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.								S	S	S	S	T	.	T											T	T				S	S										T	S										T	T	T			B			B
Template Predicted Secondary structure							.	.	.	.	.	.	.	.	.	.	.	.	.	.													.
Template SS confidence
		75	.	.	.	.															80	.	.	.	.	.	.	.	.	.	90	.		.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.
				160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.		.	.	.	230	.	.	.	.	.	.
Predicted Secondary structure		.	.																																																																				.
Query SS confidence		.	.																																																																				.
Query Sequence		.	.	T	L	T	R	A	N	R	H	N	I	S	F	A	E	V	E	S	K	L	G	L	P	L	F	V	K	P	A	N	Q	G	S	S	V	G	V	S	K	V	T	S	E	E	Q	Y	A	I	A	V	D	L	A	F	E	F	D	H	K	V	I	V	E	Q	G	I	K	G	.	R	E	I	E	C	A	V	L	G	N
Query Conservation		.	.																																																																				.
Alig confidence		.	.								.	.	.	.																																																									.
Template Conservation											.	.	.	.
Template Sequence		D	G	P	V	D	G	L	E	D	.	.	.	.	V	V	A	F	A	E	A	H	G	Y	P	I	I	I	K	A	A	L	G	G	G	G	R	G	M	R	I	V	R	S	K	S	E	V	K	E	A	F	E	R	A	K	S	E	A	K	E	V	Y	V	E	K	L	I	E	N	P	K	H	I	E	V	Q	I	L	G	D
Template Known Secondary structure		S	S			S	S				.	.	.	.										S							T	T	T		S	S	T	T						S																										S
Template Predicted Secondary structure											.	.	.	.
Template SS confidence
		140	.	.	.	.	.	.	.	.					.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.
		237	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.		.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.
Predicted Secondary structure																																						.
Query SS confidence																																						.
Query Sequence		D	N	P	Q	A	S	T	C	G	E	I	V	L	T	S	D	F	Y	A	Y	D	T	K	Y	I	D	E	D	G	A	K	V	V	V	P	A	.	A	I	A	P	E	I	N	D	K	I	R	A	I	A	V	Q	A	Y	Q	T	L	G	C	A	G	M	A	R	V	D	V	F	L	T	P	E	N	E	V	V	I	N	E
Query Conservation																																						.
Alig confidence																		.	.	.	.	.	.	.	.													.																																						.
Template Conservation																		.	.	.	.	.	.	.	.																																																			.
Template Sequence		Y	E	G	N	I	V	H	L	Y	E	R	D	C	S	V	Q	.	.	.	.	.	.	.	.	R	R	H	Q	K	V	V	E	V	A	P	S	V	S	L	S	D	E	L	R	Q	R	I	C	E	A	A	V	Q	L	M	R	S	V	G	Y	V	N	A	G	T	V	E	F	L	V	S	G	D	E	.	F	Y	F	I	E
Template Known Secondary structure		T	T	S														.	.	.	.	.	.	.	.		T	T								S		T	T																					T													T	T		.
Template Predicted Secondary structure																		.	.	.	.	.	.	.	.																																																			.
Template SS confidence
		222	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.									.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.		.	.	290	.	.
		316	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	N	T	L	P	G	F	T	N	I	S	M	Y	P	K	L	W	Q	A	S	G	L	G	Y	T	D	L	I	T	R	L	I
Query Conservation
Alig confidence												.	.	.	.
Template Conservation												.	.	.	.
Template Sequence		V	N	P	R	I	Q	V	E	H	T	.	.	.	.	I	T	E	M	I	T	G	I	D	I	V	Q	S	Q	I	L	I	A
Template Known Secondary structure					S			T	T			.	.	.	.							T
Template Predicted Secondary structure												.	.	.	.
Template SS confidence
		293	.	.	.	.	.	.	300	.	.					.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions