Job Description P0A6J8 Confidence 100.00% Date Thu Jan 5 11:03:18 GMT 2012 Rank 41 Aligned Residues 290 % Identity 20% Template c2dwcB_ PDB info PDB header:transferase Chain: B: PDB Molecule:433aa long hypothetical phosphoribosylglycinamide formyl PDBTitle: crystal structure of probable phosphoribosylglycinamide formyl2 transferase from pyrococcus horikoshii ot3 complexed with adp Resolution 1.70 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	K	L	R	V	G	I	V	F	G	G	K	S	A	E	H	E	V	S	L	Q	S	A	K	N	I	V	D	A	I	D	K	S	R	F	D	V	V	L	L	G	I	D	K	Q	G	Q	W	H	V	S	D	A	S	N	Y	L	L	N	A	D	D	P	A	H	I	A	L	R	P	S	A	T	S	L	A	Q	V	P	G
Query Conservation
Alig confidence													.	.	.	.	.	.	.	.	.																																																		.	.	.	.	.	.	.	.	.	.	.
Template Conservation													.	.	.	.	.	.	.	.	.																																																		.	.	.	.	.	.	.	.	.	.	.
Template Sequence		S	A	Q	K	I	L	L	L	G	S	G	.	.	.	.	.	.	.	.	.	E	L	G	K	E	I	A	I	E	A	Q	R	L	G	V	E	V	V	A	V	D	R	Y	A	N	A	P	A	M	Q	V	A	H	R	S	Y	V	G	N	M	M	D	K	D	F	L	W	S	V	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure		T								S		S	.	.	.	.	.	.	.	.	.													T	T								S	S	T	T							S	S					S		T	T									.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure													.	.	.	.	.	.	.	.	.																																																		.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		18	.	20	.	.	.	.	.	.	.	.										.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.		.	.	.	150	.	.	.	.	.	.	.	.	.	160
Predicted Secondary structure																																																																			.
Query SS confidence																																																																			.
Query Sequence		K	H	E	H	Q	L	I	D	A	Q	N	G	Q	P	L	P	T	V	D	V	I	F	P	I	V	H	G	T	L	G	E	D	G	S	L	Q	G	M	L	R	V	A	N	L	P	F	V	G	S	D	V	L	A	S	A	A	C	M	D	K	D	V	T	K	R	.	L	L	R	D	A	G	L	N	I	A	P	F	I	T
Query Conservation																																																																			.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.																.	.	.																.																				.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.																.	.	.																.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	V	E	R	E	K	P	D	A	I	I	P	E	I	E	A	.	.	.	I	N	L	D	A	L	F	E	F	E	K	D	G	Y	F	.	V	V	P	N	A	R	A	T	W	I	A	M	H	R	E	R	L	R	E	T	L	V	K	E	A	K	V	P	T	S	R	Y	M	Y
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.							S						S	S		.	.	.	S											T	T			.	B	S	S									T	S											T	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.																.	.	.																.
Template SS confidence
														78	.	80	.	.	.	.	.	.	.	.	.	90	.	.				.	.	.	.	.	.	.	100	.	.	.	.	.	.	.		.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.		.	.	.	230	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																				.
Query SS confidence																																																																				.
Query Sequence		L	T	R	A	N	R	H	N	I	S	F	A	E	V	E	S	K	L	G	L	P	L	F	V	K	P	A	N	Q	G	S	S	V	G	V	S	K	V	T	S	E	E	Q	Y	A	I	A	V	D	L	A	F	E	F	D	H	K	V	I	V	E	Q	G	I	K	G	.	R	E	I	E	C	A	V	L	G	N	D	N	P
Query Conservation																																																																				.
Alig confidence								.	.	.	.																	.	.	.	.																			.	.	.	.	.														.
Template Conservation								.	.	.	.																	.	.	.	.																			.	.	.	.	.
Template Sequence		A	T	T	L	D	E	.	.	.	.	L	Y	E	A	C	E	K	I	G	Y	P	C	H	T	K	A	.	.	.	.	I	M	S	G	S	Y	F	V	K	G	P	E	D	I	P	K	A	W	.	.	.	.	.	E	E	E	K	I	I	V	E	E	H	I	D	F	D	V	E	V	T	E	L	A	V	R	H	F	D	E
Template Known Secondary structure			S	S				.	.	.	.										S	S						.	.	.	.	S									S	G	G	G						.	.	.	.	.	T													S													T
Template Predicted Secondary structure								.	.	.	.																	.	.	.	.																			.	.	.	.	.
Template SS confidence
		142	.	.	.	.	.					.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.					.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.						.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.
		240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	A	S	T	C	G	E	I	V	L	T	S	D	F	Y	A	Y	D	T	K	Y	I	D	E	D	G	A	K	V	V	V	P	A	A	I	A	P	E	I	N	D	K	I	R	A	I	A	V	Q	A	Y	Q	T	L	G	C	A	G	M	A	R	V	D	V	F	L	T	P	E	N	E	V	V	I	N	E	I	N	T	L
Query Conservation
Alig confidence																	.	.	.	.	.																																																			.
Template Conservation																	.	.	.	.	.																																																			.
Template Sequence		N	G	E	I	V	T	T	F	P	K	P	V	G	H	Y	.	.	.	.	.	Q	I	D	G	D	Y	H	A	S	W	Q	P	A	E	I	S	E	K	A	E	R	E	V	Y	R	I	A	K	R	I	T	D	V	L	G	G	L	G	I	F	G	V	E	M	F	V	K	G	D	K	.	V	W	A	N	E	V	S	P	R
Template Known Secondary structure		T	S														.	.	.	.	.			T	T								S																								S	S											T	T		.								S	S
Template Predicted Secondary structure																	.	.	.	.	.																																																			.
Template SS confidence
		222	.	.	.	.	.	.	.	230	.	.	.	.	.	.						.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.		.	.	.	290	.	.	.	.	.
		320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	G	F	T	N	I	S	M	Y	P	K	L	W	Q	A	S	G	L	G	Y	T	D	L	I	T	R	L	I	E	L	A	L
Query Conservation
Alig confidence												.	.												.	.	.
Template Conservation												.	.												.	.	.
Template Sequence		P	H	D	T	G	M	V	T	L	A	.	.	S	H	P	P	G	F	S	E	F	A	L	.	.	.	H	L	R	A	V	L
Template Known Secondary structure				G	G	G	G	G				.	.		S		T	T		S					.	.	.
Template Predicted Secondary structure												.	.												.	.	.
Template SS confidence
		296	.	.	.	300	.	.	.	.	.			.	.	.	.	310	.	.	.	.	.	.				.	.	.	320	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions