Job Description P0A6J8 Confidence 100.00% Date Thu Jan 5 11:03:18 GMT 2012 Rank 22 Aligned Residues 305 % Identity 15% Template c1w96B_ PDB info PDB header:ligase Chain: B: PDB Molecule:acetyl-coenzyme a carboxylase; PDBTitle: crystal structure of biotin carboxylase domain of acetyl-2 coenzyme a carboxylase from saccharomyces cerevisiae in3 complex with soraphen a Resolution 1.8 Å

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		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.												.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.
Predicted Secondary structure																																					.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																					.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	R	V	G	I	V	F	G	G	K	S	A	E	H	E	V	S	L	Q	S	A	K	N	I	V	D	A	I	D	K	S	R	F	D	V	.	.	.	.	.	.	.	.	.	.	.	V	L	L	G	I	D	K	Q	G	Q	W	H	V	S	D	A	S	N	Y	L	L	N	A	D	D	P	A	H	I	A	L	R	P	S
Query Conservation																																					.	.	.	.	.	.	.	.	.	.	.
Alig confidence											.	.	.	.	.	.	.	.	.																		.	.	.	.	.	.	.	.	.	.	.
Template Conservation											.	.	.	.	.	.	.	.	.
Template Sequence		S	K	I	L	I	A	N	N	G	.	.	.	.	.	.	.	.	.	I	A	A	V	K	E	I	R	S	V	R	K	W	A	Y	E	T	F	G	D	D	R	T	V	Q	F	V	A	M	A	T	P	E	D	L	E	A	N	A	E	Y	I	R	M	A	D	Q	Y	I	E	V	P	G	G	T	N	N	N	N	Y	A	N
Template Known Secondary structure											.	.	.	.	.	.	.	.	.																			S		T	T	S	S													T	T							S	S								S	S	G	G	G	T	T	T
Template Predicted Secondary structure											.	.	.	.	.	.	.	.	.
Template SS confidence
		60	.	.	.	.	.	.	.	.										.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130
		73	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.			.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150
Predicted Secondary structure																																																					.	.
Query SS confidence																																																					.	.
Query Sequence		A	T	S	L	A	Q	V	P	G	K	H	E	H	Q	L	I	D	A	Q	N	G	Q	P	L	P	T	V	D	V	I	F	P	I	V	H	G	T	L	G	E	D	G	S	L	Q	G	M	L	R	V	A	.	.	N	L	P	F	V	G	S	D	V	L	A	S	A	A	C	M	D	K	D	V	T	K	R	L	L	R	D
Query Conservation																																																					.	.
Alig confidence														.	.	.	.	.	.	.	.	.	.	.	.	.	.									.																	.	.
Template Conservation														.	.	.	.	.	.	.	.	.	.	.	.	.	.									.
Template Sequence		V	D	L	I	V	D	I	A	E	R	A	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	D	A	V	W	A	G	W	.	G	H	A	S	E	N	P	L	L	P	E	K	L	S	Q	S	K	R	K	V	I	F	I	G	P	P	G	N	A	M	R	S	L	G	D	K	I	S	S	T	I	V	A	Q	S
Template Known Secondary structure												T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.		S						S	.	S	T	T	T	T		T									S	T	T					S	S									S		S
Template Predicted Secondary structure														.	.	.	.	.	.	.	.	.	.	.	.	.	.									.
Template SS confidence
		131	.	.	.	.	.	.	.	.	140	.	.															.	.	.	.	.	.	.	150		.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.
		151	.	.	.	.	.	.	.	.																											160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.
Predicted Secondary structure											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	G	L	N	I	A	P	F	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	L	T	R	A	N	R	H	N	I	S	F	A	E	V	E	S	K	L	G	L	P	L	F	V	K	P	A	N	Q	G	S	S	V	G	V	S	K	V	T	S	E	E	Q	Y
Query Conservation											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								.	.	.	.
Template Conservation																																												.	.	.	.
Template Sequence		A	K	V	P	C	I	P	W	S	G	T	G	V	D	T	V	H	V	D	E	K	T	G	L	V	S	V	D	D	D	I	Y	Q	K	G	C	C	T	S	P	E	D	.	.	.	.	G	L	Q	K	A	K	R	I	G	F	P	V	M	I	K	A	S	E	G	G	G	G	K	G	I	R	Q	V	E	R	E	E	D	F
Template Known Secondary structure		T	T			B			B	T	T	T	T								T	T	T											G	G	G	S		S	S				.	.	.	.										S	S						T	T			S	S	T	T					S	S	G	G	G
Template Predicted Secondary structure																																												.	.	.	.
Template SS confidence
		196	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.					.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.
		205	.	.	.	.	210	.	.	.	.			.	.	.	.	.	220	.	.	.	.	.	.		.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.		.	.	.	.	.	.	280
Predicted Secondary structure												.	.													.																																																.
Query SS confidence												.	.													.																																																.
Query Sequence		A	I	A	V	D	L	A	F	E	F	.	.	D	H	K	V	I	V	E	Q	G	I	K	G	.	R	E	I	E	C	A	V	L	G	N	D	N	P	Q	A	S	T	C	G	E	I	V	L	T	S	D	F	Y	A	Y	D	T	K	Y	I	D	E	D	G	A	K	V	V	V	P	A	A	.	I	A	P	E	I	N	D
Query Conservation												.	.													.																																																.
Alig confidence												.	.													.																											.	.	.	.	.	.	.	.														.
Template Conservation																																																					.	.	.	.	.	.	.	.
Template Sequence		I	A	L	Y	H	Q	A	A	N	E	I	P	G	S	P	I	F	I	M	K	L	A	G	R	A	R	H	L	E	V	Q	L	L	A	D	Q	Y	G	T	N	I	S	L	F	G	R	D	C	S	V	Q	.	.	.	.	.	.	.	.	R	R	H	Q	K	I	I	E	E	A	P	V	T	I	A	K	A	E	T	F	H
Template Known Secondary structure												S	T	T											S												T	T	S														.	.	.	.	.	.	.	.		T	T								S			S	S
Template Predicted Secondary structure																																																					.	.	.	.	.	.	.	.
Template SS confidence
		272	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.									.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.
		281	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.		.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.
Predicted Secondary structure																												.
Query SS confidence																												.
Query Sequence		K	I	R	A	I	A	V	Q	A	Y	Q	T	L	G	C	A	G	M	A	R	V	D	V	F	L	T	.	P	E	N	E	V	V	I	N	E	I	N	T	L	P	G	F	T	N	I	S	M	Y	P	K	L	W	Q	A	S	G	L	G	Y	T	D	L	I	T	R	L	I	E	L	A	L
Query Conservation																												.
Alig confidence																												.																		.	.	.	.																.	.	.
Template Conservation																																														.	.	.	.																.	.	.
Template Sequence		E	M	E	K	A	A	V	R	L	G	K	L	V	G	Y	V	S	A	G	T	V	E	Y	L	Y	S	H	D	D	G	K	F	Y	F	L	E	L	N	P	R	L	Q	V	E	.	.	.	.	H	P	T	T	E	M	V	S	G	V	N	L	P	A	A	.	.	.	Q	L	Q	I	A	M
Template Known Secondary structure															T													T	T	T	T										S			T	T	.	.	.	.	T															.	.	.						T
Template Predicted Secondary structure																																														.	.	.	.																.	.	.
Template SS confidence
		344	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.					.	.	390	.	.	.	.	.	.	.	.	.	400	.	.				.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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