Job Description P0A6J8 Confidence 100.00% Date Thu Jan 5 11:03:18 GMT 2012 Rank 18 Aligned Residues 305 % Identity 18% Template c1ulzA_ PDB info PDB header:ligase Chain: A: PDB Molecule:pyruvate carboxylase n-terminal domain; PDBTitle: crystal structure of the biotin carboxylase subunit of pyruvate2 carboxylase Resolution 2.20 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure
Query SS confidence
Query Sequence		M	E	K	L	R	V	G	I	V	F	G	G	K	S	A	E	H	E	V	S	L	Q	S	A	K	N	I	V	D	A	I	D	K	S	R	F	D	V	V	L	L	G	I	D	K	Q	G	Q	W	H	V	S	D	A	S	N	Y	L	L	N	A	D	D	P	A	H	I	A	L	R	P	S	A	T	S	L	A	Q	V	P
Query Conservation
Alig confidence					.	.								.	.	.	.	.	.	.	.	.
Template Conservation					.	.								.	.	.	.	.	.	.	.	.
Template Sequence		V	N	K	.	.	V	L	V	A	N	R	G	.	.	.	.	.	.	.	.	.	E	I	A	V	R	I	I	R	A	C	K	E	L	G	I	P	T	V	A	I	Y	N	E	V	E	S	T	A	R	H	V	K	L	A	D	E	A	Y	M	I	G	T	D	P	L	D	T	Y	L	N	K	Q	R	I	I	N	L	A	L
Template Known Secondary structure			S	S	.	.								.	.	.	.	.	.	.	.	.														T									G	G	G	T	T							S	S							S	S	T	T
Template Predicted Secondary structure					.	.								.	.	.	.	.	.	.	.	.
Template SS confidence
		2	.	.			.	.	.	.	.	10	.										.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																																	.
Query SS confidence																																																																																	.
Query Sequence		G	K	H	E	H	Q	L	I	D	A	Q	N	G	Q	P	L	P	T	V	D	V	I	F	P	I	V	H	G	T	L	G	E	D	G	S	L	Q	G	M	L	R	V	A	N	L	P	F	V	G	S	D	V	L	A	S	A	A	C	M	D	K	D	V	T	K	R	L	L	R	D	A	G	L	N	I	A	P	F	I	.
Query Conservation																																																																																	.
Alig confidence						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.							.																																																						.
Template Conservation						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.							.
Template Sequence		E	V	G	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	A	I	H	P	G	.	Y	G	F	L	A	E	N	A	E	F	A	K	M	C	E	E	A	G	I	T	F	I	G	P	H	W	K	V	I	E	L	M	G	D	K	A	R	S	K	E	V	M	K	K	A	G	V	P	V	V	P	G	S	D
Template Known Secondary structure			T	T		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.							.	S	S	T	T	T	T											T	T				S	S	S										S											T	T			B			B		S
Template Predicted Secondary structure						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.							.
Template SS confidence
		71	.	.	.																.	.	.	.	.	80		.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.
			160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.							.	.	.	.	220	.	.	.	.	.	.		.	.	.	230	.
Predicted Secondary structure		.																																																									.	.	.	.	.	.												.
Query SS confidence		.																																																									.	.	.	.	.	.												.
Query Sequence		.	T	L	T	R	A	N	R	H	N	I	S	F	A	E	V	E	S	K	L	G	L	P	L	F	V	K	P	A	N	Q	G	S	S	V	G	V	S	K	V	T	S	E	E	Q	Y	A	I	A	V	D	L	A	F	E	F	D	.	.	.	.	.	.	H	K	V	I	V	E	Q	G	I	K	G	.	R	E	I	E	C
Query Conservation		.																																																									.	.	.	.	.	.												.
Alig confidence		.								.	.	.	.																																														.	.	.	.	.	.												.
Template Conservation										.	.	.	.
Template Sequence		G	V	L	K	S	L	E	E	.	.	.	.	A	K	A	L	A	R	E	I	G	Y	P	V	L	L	K	A	T	A	G	G	G	G	R	G	I	R	I	C	R	N	E	E	E	L	V	K	N	Y	E	Q	A	S	R	E	A	E	K	A	F	G	R	G	D	L	L	L	E	K	F	I	E	N	P	K	H	I	E	Y
Template Known Secondary structure		S	S							.	.	.	.										S	S							S	S	S	S			S					S	S																		T	T	S												S
Template Predicted Secondary structure										.	.	.	.
Template SS confidence
		135	.	.	.	.	140	.	.					.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
		232	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.		.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310
Predicted Secondary structure																																												.
Query SS confidence																																												.
Query Sequence		A	V	L	G	N	D	N	P	Q	A	S	T	C	G	E	I	V	L	T	S	D	F	Y	A	Y	D	T	K	Y	I	D	E	D	G	A	K	V	V	V	P	A	A	.	I	A	P	E	I	N	D	K	I	R	A	I	A	V	Q	A	Y	Q	T	L	G	C	A	G	M	A	R	V	D	V	F	L	T	P	E	N	E
Query Conservation																																												.
Alig confidence																							.	.	.	.	.	.	.	.														.
Template Conservation																							.	.	.	.	.	.	.	.
Template Sequence		Q	V	L	G	D	K	H	G	N	V	I	H	L	G	E	R	D	C	S	I	Q	.	.	.	.	.	.	.	.	R	R	N	Q	K	L	V	E	I	A	P	S	L	I	L	T	P	E	K	R	E	Y	Y	G	N	I	V	T	K	A	A	K	E	I	G	Y	Y	N	A	G	T	M	E	F	I	A	D	Q	E	G	N
Template Known Secondary structure							T	T	S														.	.	.	.	.	.	.	.		T	T								S		S	S																				T	T													T	T
Template Predicted Secondary structure																							.	.	.	.	.	.	.	.
Template SS confidence
		211	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.									.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.
		311	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	V	I	N	E	I	N	T	L	P	G	F	T	N	I	S	M	Y	P	K	L	W	Q	A	S	G	L	G	Y	T	D	L	I	T	R	L	I	E	L	A	L
Query Conservation
Alig confidence																	.	.	.	.														.	.	.
Template Conservation																	.	.	.	.														.	.	.
Template Sequence		L	Y	F	I	E	M	N	T	R	I	Q	V	E	H	P	.	.	.	.	V	S	E	M	V	T	G	I	D	I	V	K	W	.	.	.	Q	I	K	I	A	A
Template Known Secondary structure										S			T	T			.	.	.	.														.	.	.						T
Template Predicted Secondary structure																	.	.	.	.														.	.	.
Template SS confidence
		283	.	.	.	.	.	.	290	.	.	.	.	.	.	.					.	.	300	.	.	.	.	.	.	.	.	.	310				.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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