Job Description P0A6J8 Confidence 100.00% Date Thu Jan 5 11:03:18 GMT 2012 Rank 42 Aligned Residues 295 % Identity 15% Template c1gsoA_ PDB info PDB header:ligase Chain: A: PDB Molecule:protein (glycinamide ribonucleotide synthetase); PDBTitle: glycinamide ribonucleotide synthetase (gar-syn) from e.2 coli. Resolution 1.60 Å

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		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.		.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
Predicted Secondary structure																																			.
Query SS confidence																																			.
Query Sequence		L	R	V	G	I	V	F	G	G	K	S	A	E	H	E	V	S	L	Q	S	A	K	N	I	V	D	A	I	D	K	S	R	F	.	D	V	V	L	L	G	I	D	K	Q	G	Q	W	H	V	S	D	A	S	N	Y	L	L	N	A	D	D	P	A	H	I	A	L	R	P	S	A	T	S	L	A	Q	V	P	G	K
Query Conservation																																			.
Alig confidence											.	.	.	.	.	.	.	.	.																.																																			.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation											.	.	.	.	.	.	.	.	.																																																			.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		M	K	V	L	V	I	G	N	G	.	.	.	.	.	.	.	.	.	G	R	E	H	A	L	A	W	K	A	A	Q	S	P	L	V	E	T	V	F	V	A	P	G	N	A	G	T	A	L	E	P	A	L	Q	N	V	A	I	G	V	T	D	I	P	A	L	L	D	F	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure										S	.	.	.	.	.	.	.	.	.											T	T		T	T																S	T	T								T	T									.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure											.	.	.	.	.	.	.	.	.																																																			.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		1	.	.	.	.	.	.	.	.										10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	E	H	Q	L	I	D	A	Q	N	G	Q	P	L	P	T	V	D	V	I	F	P	I	V	H	G	T	L	G	E	D	G	S	L	Q	G	M	L	R	V	A	N	L	P	F	V	G	S	D	V	L	A	S	A	A	C	M	D	K	D	V	T	K	R	L	L	R	D	A	G	L	N	I	A	P	F	I	T	L	T
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.															.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.															.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	A	Q	N	E	K	I	D	L	T	I	V	G	P	E	.	.	A	P	L	V	K	G	V	V	D	T	F	R	A	A	G	L	K	I	F	G	P	T	A	G	A	A	Q	L	E	G	S	K	A	F	T	K	D	F	L	A	R	H	K	I	P	T	A	E	Y	Q	N	F	T
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.				T	T		S						S		.	.					T	T								T	T					S			T	T	T	T																T	T			B							S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.															.	.
Template SS confidence
													60	.	.	.	.	.	.	.	.	.	70	.	.	.			.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.
		163	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.							.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.
Predicted Secondary structure																																																						.	.	.	.	.	.
Query SS confidence																																																						.	.	.	.	.	.
Query Sequence		R	A	N	R	H	N	I	S	F	A	E	V	E	S	K	L	G	L	P	L	F	V	K	P	A	N	Q	G	S	S	V	G	V	S	K	V	T	S	E	E	Q	Y	A	I	A	V	D	L	A	F	E	F	.	.	.	.	.	.	D	H	K	V	I	V	E	Q	G	I	K	G	R	E	I	E	C	A	V	L	G	N
Query Conservation																																																						.	.	.	.	.	.
Alig confidence						.	.	.	.																	.	.	.	.	.	.																							.	.	.	.	.	.
Template Conservation						.	.	.	.																	.	.	.	.	.	.
Template Sequence		E	V	E	P	.	.	.	.	A	L	A	Y	L	R	E	K	G	A	P	I	V	I	K	A	.	.	.	.	.	.	K	G	V	I	V	A	M	T	L	E	E	A	E	A	A	V	H	D	M	L	A	G	N	A	F	G	D	A	G	H	R	I	V	I	E	E	F	L	D	G	E	E	A	S	F	I	V	M	V	D
Template Known Secondary structure		S	S	S		.	.	.	.										S	S						.	.	.	.	.	.							S	S									T	T	T	T		S			T	T		T	T
Template Predicted Secondary structure						.	.	.	.																	.	.	.	.	.	.
Template SS confidence
		127	.	.	130					.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.							.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.
		237	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.						.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.			.	.	.	.	.	300	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																								.	.	.	.	.																					.	.
Query SS confidence																																								.	.	.	.	.																					.	.
Query Sequence		D	N	P	Q	A	S	T	C	G	E	I	V	L	T	S	D	F	Y	A	Y	D	T	K	Y	I	D	E	D	G	A	K	V	V	V	P	A	A	I	.	.	.	.	.	A	P	E	I	N	D	K	I	R	A	I	A	V	Q	A	Y	Q	T	L	G	.	.	C	A	G	M	A	R	V	D	V	F	L	T	P	E	N
Query Conservation																																								.	.	.	.	.																					.	.
Alig confidence																			.	.																				.	.	.	.	.																					.	.
Template Conservation																			.	.
Template Sequence		G	E	H	V	L	P	M	A	T	S	Q	D	H	K	R	V	G	.	.	D	K	D	T	G	P	N	T	G	G	M	G	A	Y	S	P	A	P	V	V	T	D	D	V	H	Q	R	T	M	E	R	I	I	W	P	T	V	K	G	M	A	A	E	G	N	T	Y	T	G	F	L	Y	A	G	L	M	I	D	K	Q	G
Template Known Secondary structure		S	S																.	.	T	T	T													S		T	T													T											T	T															T	T
Template Predicted Secondary structure																			.	.
Template SS confidence
		203	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.			220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
		310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	V	V	I	N	E	I	N	T	L	P	G	F	T	N	I	S	M	Y	P	K	L	W	Q	A	S	G	L	G	Y	T	D	L	I	T	R	L	I
Query Conservation
Alig confidence																								.	.	.
Template Conservation																								.	.	.
Template Sequence		N	P	K	V	I	E	F	N	C	R	F	G	D	L	E	T	Q	P	I	M	L	R	.	.	.	M	K	S	D	L	V	E	L	C	L	A	A	C
Template Known Secondary structure										S	S			T	T	T								.	.	.	B		S
Template Predicted Secondary structure																								.	.	.
Template SS confidence
		281	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.				.	.	.	.	.	.	.	310	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions