Job Description P0A6J8 Confidence 98.56% Date Thu Jan 5 11:03:18 GMT 2012 Rank 86 Aligned Residues 160 % Identity 18% Template c1eucB_ PDB info PDB header:ligase Chain: B: PDB Molecule:succinyl-coa synthetase, beta chain; PDBTitle: crystal structure of dephosphorylated pig heart, gtp-2 specific succinyl-coa synthetase Resolution 2.10 Å

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		142	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180		.	.	.	.	.	.	.	.	.	190	.	.	.	.	.												.	.	.	.	200	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																									.																.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																									.																.	.	.	.	.	.	.	.	.	.	.
Query Sequence		D	V	T	K	R	L	L	R	D	A	G	L	N	I	A	P	F	I	T	L	T	R	A	N	R	H	N	I	S	F	A	E	V	E	S	K	L	G	L	.	P	L	F	V	K	P	A	N	Q	G	S	S	V	G	V	.	.	.	.	.	.	.	.	.	.	.	S	K	V	T	S	E	E	Q	Y	A	I	A	V	D
Query Conservation																																									.																.	.	.	.	.	.	.	.	.	.	.
Alig confidence																											.	.	.	.											.																.	.	.	.	.	.	.	.	.	.	.
Template Conservation																											.	.	.	.
Template Sequence		Y	Q	S	K	K	L	M	S	D	N	G	V	K	V	Q	R	F	F	V	A	D	T	A	N	E	.	.	.	.	A	L	E	A	A	K	R	L	N	A	K	E	I	V	L	K	A	Q	I	L	A	G	G	R	G	K	G	V	F	S	S	G	L	K	G	G	V	H	L	T	K	D	P	E	V	V	G	Q	L	A	K
Template Known Secondary structure										T	T	T										S	S				.	.	.	.									T		S	S								S	S	S			T	T				T	T	S		B		S					S
Template Predicted Secondary structure																											.	.	.	.
Template SS confidence
		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30					.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
		210	.	.														.	.	.	.	.	.	.	220	.	.	.	.	.		.	.	.	.	230	.	.	.	.	.	.	.	.	.		240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.
Predicted Secondary structure					.	.	.	.	.	.	.	.	.	.	.	.	.														.															.																																		.	.
Query SS confidence					.	.	.	.	.	.	.	.	.	.	.	.	.														.															.																																		.	.
Query Sequence		L	A	F	.	.	.	.	.	.	.	.	.	.	.	.	.	E	F	D	H	K	V	I	V	E	Q	G	I	K	.	G	R	E	I	E	C	A	V	L	G	N	D	N	P	.	Q	A	S	T	C	G	E	I	V	L	T	S	D	F	Y	A	Y	D	T	K	Y	I	D	E	D	G	A	K	V	V	V	P	A	.	.
Query Conservation					.	.	.	.	.	.	.	.	.	.	.	.	.														.															.																																		.	.
Alig confidence					.	.	.	.	.	.	.	.	.	.	.	.	.														.															.																																		.	.
Template Conservation
Template Sequence		Q	M	I	G	Y	N	L	A	T	K	Q	T	P	K	E	G	V	K	V	N	K	V	M	V	A	E	A	L	D	I	S	R	E	T	Y	L	A	I	L	M	D	R	S	C	N	G	P	V	L	V	G	S	P	Q	G	G	V	D	I	E	E	V	A	A	S	N	P	E	L	I	F	K	E	Q	I	D	I	I	E	G
Template Known Secondary structure		T	T	T	T	S					T	T	S		T	T																S											G	G	G	T								S	S		S	S										G	G	G							B	T	T	T	B
Template Predicted Secondary structure
Template SS confidence
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
															273	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	A	I	A	P	E	I	N	D	K	I	R	A	I	A	V	Q	A	Y	Q	T	L	G	C	A	G	M	A	R	V	D	V	F	L	T	P	E	N	E	V	V	I	N	E	I	N	T
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																				.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		I	K	D	S	Q	A	Q	R	M	A	E	N	L	G	F	L	G	P	L	Q	N	Q	A	A	D	Q	I	K	K	L	Y	N	L	F	.	.	.	.	.	.	.	.	.	.	.	.	.	L	K	I	D	A	T	Q	V	E	V	N	P
Template Known Secondary structure														T	T			T																		.	.	.	.	.	.	.	.	.	.	.	.	.			T	T
Template Predicted Secondary structure																																				.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.														.	.	.	.	200	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions