Job Description Q47688 Confidence 98.30% Date Thu Jan 5 12:37:02 GMT 2012 Rank 16 Aligned Residues 219 % Identity 15% Template d1xr5a_ SCOP info DNA/RNA polymerases DNA/RNA polymerases RNA-dependent RNA-polymerase Resolution 2.80

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		91	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170
Predicted Secondary structure
Query SS confidence
Query Sequence		G	K	L	R	P	L	G	I	P	A	L	R	D	R	I	V	Q	R	A	M	L	M	A	M	E	P	I	W	E	S	D	F	H	T	L	S	Y	G	F	R	P	E	R	S	V	H	H	A	I	R	T	V	K	L	Q	L	T	D	C	G	E	T	R	G	R	W	V	I	E	G	D	L	S	S	Y	F	D	T	V	H
Query Conservation
Alig confidence																																	.																									.	.	.	.	.	.	.
Template Conservation																																	.																									.	.	.	.	.	.	.
Template Sequence		G	K	S	R	L	I	E	A	S	S	L	N	D	S	V	N	M	R	M	K	L	G	N	L	Y	K	A	F	H	Q	N	.	P	G	V	L	T	G	S	A	V	G	C	D	P	D	V	F	W	S	V	I	P	C	L	M	.	.	.	.	.	.	.	D	G	H	L	M	A	F	D	Y	S	N	F	D	A	S	L	S
Template Known Secondary structure		T																	T	T	T	S											.	T	B	T	T	T	T	B		S	S							G	G	G						.	.	.	.	.	.	.		S								S	S	T	G	G	G
Template Predicted Secondary structure																																	.																									.	.	.	.	.	.	.
Template SS confidence
		171	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.		.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.								.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.
		171				.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.
Predicted Secondary structure			.	.	.
Query SS confidence			.	.	.
Query Sequence		H	.	.	.	R	L	L	M	K	A	V	R	R	R	I	S	D	A	R	F	M	T	L	L	W	K	T	I	K	A	G	H	I	D	V	G	L	F	R	A	A	S	E	G	V	P	Q	G	G	V	I	S	P	L	L	S	N	I	M	L	N	E	F	D	Q	Y	L	H	E	R	Y	L	S	G	K	A	R	K	D	R
Query Conservation			.	.	.
Alig confidence			.	.	.																.	.																																																							.	.	.	.	.
Template Conservation																					.	.																																																							.	.	.	.	.
Template Sequence		P	V	W	F	V	C	L	E	K	V	L	T	K	L	G	F	A	G	S	.	.	S	L	I	Q	S	I	C	N	T	H	H	I	F	R	D	E	I	Y	V	V	E	G	G	M	P	S	G	C	S	G	T	S	I	F	N	S	M	I	N	N	I	I	I	R	T	L	I	L	D	A	Y	K	G	I	.	.	.	.	.
Template Known Secondary structure																T		T	T	T	.	.	T							S						S	S	S						S				T	T	S	S	S																						S	S		.	.	.	.	.
Template Predicted Secondary structure																					.	.																																																							.	.	.	.	.
Template SS confidence
		243	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.			.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.
		248	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.		.	.	.	.	.	.	.	.	320	.	.			.	.
Predicted Secondary structure																																																																		.												.	.
Query SS confidence																																																																		.												.	.
Query Sequence		W	Y	W	N	N	S	I	Q	R	G	R	S	T	A	V	R	E	N	W	Q	W	K	P	A	V	A	Y	C	R	Y	A	D	D	F	V	L	I	V	K	G	T	K	A	Q	V	E	A	I	R	E	E	C	R	G	V	L	E	G	S	L	K	L	R	L	.	N	M	D	K	T	K	I	P	H	V	N	.	.	D	G
Query Conservation																																																																		.												.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.	.	.	.	.													.						.												.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.	.	.	.	.													.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	L	D	K	L	K	I	L	A	Y	G	D	D	L	I	V	S	Y	P	Y	E	.	.	.	.	.	L	D	P	Q	V	L	A	T	L	G	K	N	.	Y	G	L	T	I	T	P	P	D	K	S	E	T	F	T	K	M	T	W	E	N
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		G	G	G							T	T							S	S		.	.	.	.	.											T	T	.	T	T							S	S		S	S						T	T	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.	.	.	.	.													.
Template SS confidence
																						316	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.						.	.	.	340	.	.	.	.	.	.	.	.		.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.
		325	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Predicted Secondary structure
Query SS confidence
Query Sequence		F	I	F	L	G	H	R	L	I	R	K	R	S	R	Y	G	E	M	R	V	V	S	T	I	P	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	T	F	L	K	R	Y	F	K	P	D	Q	Q	F	P	F	L	V	H	P	V	M	P	M	K	D
Template Known Secondary structure				B	T	T	B						S	S	S	T	T	S
Template Predicted Secondary structure
Template SS confidence
		370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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