Job Description Q47688 Confidence 99.88% Date Thu Jan 5 12:37:02 GMT 2012 Rank 1 Aligned Residues 230 % Identity 16% Template c3du6A_ PDB info PDB header:transferase Chain: A: PDB Molecule:telomerase reverse transcriptase; PDBTitle: structure of the catalytic subunit of telomerase, tert Resolution 2.71 Å

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		53	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.				100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																	.	.	.
Query SS confidence																																																	.	.	.
Query Sequence		K	T	M	L	Q	A	R	L	A	V	E	L	Q	I	L	R	D	E	L	L	S	G	H	Y	Q	P	L	P	A	R	R	V	Y	I	P	K	S	N	G	K	L	R	P	L	G	I	P	.	.	.	A	L	R	D	R	I	V	Q	R	A	M	L	M	A	M	E	P	I	W	E	S	D	F	H	T	L	S	Y	G	F
Query Conservation																																																	.	.	.
Alig confidence																																									.								.	.	.																						.	.	.	.	.	.	.	.
Template Conservation																																									.																																.	.	.	.	.	.	.	.
Template Sequence		Y	I	S	F	E	S	K	V	F	H	K	L	K	K	M	K	Y	L	V	E	V	Q	D	E	V	K	P	R	G	V	L	N	I	I	P	K	Q	D	N	.	F	R	A	I	V	S	I	F	P	D	S	A	R	K	P	F	F	K	L	L	T	S	K	I	Y	K	V	L	E	E	K	.	.	.	.	.	.	.	.	Y
Template Known Secondary structure																	S	S					S			S			S	S								T	T		.									S		S	S																				.	.	.	.	.	.	.	.	S
Template Predicted Secondary structure																																									.																																.	.	.	.	.	.	.	.
Template SS confidence
		154	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.		.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.									.
		130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180				.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.		.	.
Predicted Secondary structure																																																					.	.	.																								.
Query SS confidence																																																					.	.	.																								.
Query Sequence		R	P	E	R	S	V	H	H	A	I	R	T	V	K	L	Q	L	T	D	C	G	E	T	R	G	R	W	V	I	E	G	D	L	S	S	Y	F	D	T	V	H	H	R	L	L	M	K	A	V	R	R	.	.	.	R	I	S	D	A	R	F	M	T	L	L	W	K	T	I	K	A	G	H	I	D	V	G	.	L	F
Query Conservation																																																					.	.	.																								.
Alig confidence																				.	.	.	.	.																													.	.	.																								.
Template Conservation																				.	.	.	.	.
Template Sequence		K	T	S	G	S	L	Y	T	C	W	S	E	F	T	Q	K	T	Q	.	.	.	.	.	G	Q	I	Y	G	I	K	V	D	I	R	D	A	Y	G	N	V	K	I	P	V	L	C	K	L	I	Q	S	I	P	T	H	L	L	D	S	E	K	K	N	F	I	V	D	H	I	S	N	Q	F	V	A	F	R	R	K	I
Template Known Secondary structure																				.	.	.	.	.	S									B	S		T	T	T	T													S		T	T	T	T																				S	S	S
Template Predicted Secondary structure																				.	.	.	.	.
Template SS confidence
		225	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.						.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.
		206	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	A	A	S	E	G	V	P	Q	G	G	V	I	S	P	L	L	S	N	I	M	L	N	E	F	D	Q	Y	L	H	E	R	Y	L	S	G	K	A	R	K	D	R	W	Y	W	N	N	S	I	Q	R	G	R	S	T	A	V	R	E	N	W	Q	W	K	P	A	V	A	Y	C	R	Y	A	D	D	F	V	L	I	V
Query Conservation
Alig confidence																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		Y	K	W	N	H	G	L	L	Q	G	D	P	L	S	G	C	L	C	E	L	Y	M	A	F	M	D	R	L	Y	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	F	S	N	L	D	K	D	A	F	I	H	R	T	V	D	D	Y	F	F	C	S
Template Known Secondary structure						S	S	S		B	T	S	T	T																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.			S	S		T	T	S						S	S
Template Predicted Secondary structure																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.																															.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.
		286	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.						320	.	.	.	.	.	.	.	.	.	330	.	.	.
Predicted Secondary structure																																				.	.	.	.	.
Query SS confidence																																				.	.	.	.	.
Query Sequence		K	G	T	K	A	Q	V	E	A	I	R	E	E	C	R	G	V	L	E	G	S	L	K	L	R	L	N	M	D	K	T	K	I	P	.	.	.	.	.	H	V	N	D	G	F	I	F	L	G	H	R	L	I
Query Conservation																																				.	.	.	.	.
Alig confidence					.							.										.	.	.	.	.										.	.	.	.	.
Template Conservation					.							.										.	.	.	.	.
Template Sequence		P	H	P	.	H	K	V	Y	D	F	.	E	L	L	I	K	G	V	Y	Q	.	.	.	.	.	V	N	P	T	K	T	R	T	N	L	P	T	H	R	H	P	Q	D	E	I	P	Y	C	G	K	I	F	N
Template Known Secondary structure		S	S	T	.							.								S		.	.	.	.	.	B		T	T	S						T	T	S	S	S			S					T	T
Template Predicted Secondary structure					.							.										.	.	.	.	.
Template SS confidence
		350	.	.		.	.	.	.	.	.		.	360	.	.	.	.	.	.	.						.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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