Return to main results Retrieve Phyre Job Id

Job DescriptionP39453
Confidence96.53%DateThu Jan 5 12:00:52 GMT 2012
Rank201Aligned Residues109
% Identity9%Templated7reqa2
SCOP infoFlavodoxin-like Cobalamin (vitamin B12)-binding domain Cobalamin (vitamin B12)-binding domain
Resolution2.20

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   688.690.........700.........710. ........720.........730......... 740.........750.........760..
Predicted Secondary structure 










...












..






Query SS confidence 























. . .



























. .






















Query Sequence  EDNPLTQRITIEMLKTSGAQIVAV. . . GNAAQALETLQNSEPFAAALVDFDLPDI. . DGITLARQLAQQYPSLVLIGFSA
Query Conservation 

           
   
  
  
...  
  

         
 

 
  

 
.. 
      

      


  

Alig confidence 























...














.











..






















Template Conservation 
 
  
   

  
   
 


 

   
 
     
    
.


 

            
   

  
   
 
  

Template Sequence  DGHDRGQKVIATAYADLGFDVDVGPLFQTPEETARQAVEADV. HVVGVSSLAGGHLTLVPALRKELDKLGRPDILITVGG
Template Known Secondary structure 



TT


TTB
T
.S
SS
TT
TTS
Template Predicted Secondary structure 











.












Template SS confidence 















































































   608.610.........620.........630.........640......... 650.........660.........670.........680......
 
   763......770.........780...... ...790.......
Predicted Secondary structure 










.
Query SS confidence 























.










Query Sequence  HVIDETLRQRTSSLFRGIIPKPVP. REVLGQLLAHY
Query Conservation               
    
 

  .   
   
   
Alig confidence 























.










Template Conservation         
 
   


     
         
   
Template Sequence  VIPEQDFDELRKDGAVEIYTPGTVIPESAISLVKKL
Template Known Secondary structure  S

GGGT
TT

Template Predicted Secondary structure 












Template SS confidence 



































   687..690.........700.........710.........720..
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions