Return to main results Retrieve Phyre Job Id

Job DescriptionP39453
Confidence96.96%DateThu Jan 5 12:00:52 GMT 2012
Rank187Aligned Residues143
% Identity22%Templated2iwxa1
SCOP infoATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase Heat shock protein 90, HSP90, N-terminal domain
Resolution1.5

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   555....560.........570....... ..580.........590.........600.........610.........
Predicted Secondary structure 





...............















Query SS confidence 






















. . . . . . . . . . . . . . .









































Query Sequence  LMGDPRRIRQVITNLLSNALRFT. . . . . . . . . . . . . . . DEGYIILRSRTDGEQWLVEVEDSGCGIDPAKLAEIFQPFVQV
Query Conservation     
   
 


 

  

    ...............  
 
              
 
 
 

       

  
   
Alig confidence 







...











...............









































Template Conservation 


     ...







 

 
                    
    
     
 
 


 

           

 
Template Sequence  VYSNKEIF. . . LRELISNASDALDKIRYKSLSDPKQLETEPDLFIRITPKPEQKVLEIRDSGIGMTKAELINNLGTIAKS
Template Known Secondary structure 

S
TT...TTT
GGGGTTS



GGGT
SS


TT


S
Template Predicted Secondary structure 





...

























Template SS confidence 















































































   23......30 .........40.........50.........60.........70.........80.........90.........
 
   620.. .......630.........640......... 650.........660.........670.........680....
Predicted Secondary structure 


..............








.





















Query SS confidence 


. . . . . . . . . . . . . .


























.


































Query Sequence  SGK. . . . . . . . . . . . . . RGGTGLGLTISSRLAQAMGGELSATST. PEVGSCFCLRLPLRVATAPVPKTVNQAVRLDGLRL
Query Conservation     ..............  
 



 
         
 
   
 .   

 
   

                      
Alig confidence 


..............















....






.


































Template Conservation   
               

  


  
   
  ....   
 
                               

 
 
Template Sequence  GTKAFMEALSAGADVSMIGQFGVGFYSLFLVAD. . . . RVQVISKSNDDEQYIWESNAGGSFTVTLDEVNERIGRGTILRL
Template Known Secondary structure  TT

GGGGGGGT
GGGGGGGT....
TTS


SSS
SSS


SS
Template Predicted Secondary structure 













....




















Template SS confidence 















































































   100.........110.........120.........130.. .......140.........150.........160.........170.....
 
   685....690.. .......700....
Predicted Secondary structure 



..
Query SS confidence 







. .











Query Sequence  LLIEDNPL. . TQRITIEMLKTS
Query Conservation 
 


   ..        
   
Alig confidence 







..











Template Conservation   
            
  

 
 
Template Sequence  FLKDDQLEYLEEKRIKEVIKRH
Template Known Secondary structure 
TT
GGGG
Template Predicted Secondary structure 




Template SS confidence 





















   176...180.........190.......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions