Return to main results Retrieve Phyre Job Id

Job DescriptionP39453
Confidence77.05%DateThu Jan 5 12:00:52 GMT 2012
Rank260Aligned Residues97
% Identity15%Templated1vc4a_
SCOP infoTIM beta/alpha-barrel Ribulose-phoshate binding barrel Tryptophan biosynthesis enzymes
Resolution1.80

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   684.....690.........700.........710.........720.........730.. .......740.........750.......
Predicted Secondary structure 


















......











Query SS confidence 
















































. . . . . .
























Query Sequence  LLLIEDNPLTQRITIEMLKTSGAQIVAVGNAAQALETLQNSEPFAAALV. . . . . . DFDLPDIDGITLARQLAQQYPSLVL
Query Conservation 

 


           
   
  
  
  
  

         
 

 ......
  

 
 
      

      

Alig confidence 










































.




......
























Template Conservation 


   
   
 

   
  


  



    
   
   

.  







 
   
      
   
        
Template Sequence  LLIVALLGELTGAYLEEARRLGLEALVEVHTERELEIALEAGA. EVLGINNRDLATLHINLETAPRLGRLARKRGFGGVL
Template Known Secondary structure  GGGT

ST
.SSB
TTT

B
TTTT

S
Template Predicted Secondary structure 













.














Template SS confidence 















































































   133......140.........150.........160.........170..... ....180.........190.........200.........210.
 
   758.760.........770.........780..
Predicted Secondary structure 







Query SS confidence 
























Query Sequence  IGFSAHVIDETLRQRTSSLFRGIIP
Query Conservation 
  

             
    
 
Alig confidence 












.










Template Conservation 





 
 


 . 
  






Template Sequence  VAESGYSRKEELK. ALEGLFDAVLI
Template Known Secondary structure  S


S.TTTTT
S
Template Predicted Secondary structure 




.



Template SS confidence 
























   212.......220.... .....230.....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions