 |
Job Description | P39453 | Confidence | 45.72% | Date | Thu Jan 5 12:00:52 GMT 2012 |
Rank | 395 | Aligned Residues | 67 |
% Identity | 18% | Template | d1ka9h_ |
SCOP info | Flavodoxin-like
| Class I glutamine amidotransferase-like
| Class I glutamine amidotransferases (GAT)
|
Resolution | 2.30 |
|
 |
  |   |
683 | . | . | . | . | . | . | 690 | . | . | . | . | . | . | . | . | . | 700 | . | . | . | . | . | . | . | . | . | 710 | . | . | . | . | . | . | . | . | . | 720 | . | . | . | . | . | . | . | . | . | 730 | . | . | . | . | . | . | . | . | |
. | 740 | . | . | . | . | |
|
|
|
|
|
|
|
|
. | . | . | . | . | 750 | |
. |
Predicted Secondary structure |   |
 |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
|
|
|
|
| . |
|
|  |  |  |  | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  | . |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
| . |
|
Query Sequence |   |
R | L | L | L | I | E | D | N | P | L | T | Q | R | I | T | I | E | M | L | K | T | S | G | A | Q | I | V | A | V | G | N | A | A | Q | A | L | E | T | L | Q | N | S | E | P | F | A | A | A | L | V | D | F | D | L | P | D | . |
I | D | G | I | T | L | . |
. |
. |
. |
. |
. |
. |
. |
. |
A | R | Q | L | A | Q | . |
Q |
Query Conservation |   |
  |
|
|   |
|
|
|   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|   |   |
|   |   |
|   |   |
|   |   |
|
|   |   |   |   |   |   |   |   |   |
|   |
|
|   |
|   |   |
|
|   | . |
|   |
|   |   |   | . | . | . | . | . | . | . | . | . |   |   |   |
|
|   | . |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
| . |
|
|
|
|
|
| . | . | . | . | . | . | . | . | . |
|
|
|
|
|
| . |
|
Template Conservation |   |
  |
|   |
|
|
|   |
|   |   |   |   |   |   |   |   |   |
|
|   |   |   |
|   |   |
|   |   |   |   |   |   |   | . | . | . | . | . | . | . |   |
|   |   |   |
|
|
|
| . | . | . | . |
|
|
|
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|   |   |   |   |
Template Sequence |   |
K | A | L | L | I | D | Y | G | S | G | N | L | R | S | A | A | K | A | L | E | A | A | G | F | S | V | A | V | A | Q | D | P | K | . |
. |
. |
. |
. |
. |
. |
A | H | E | E | A | D | L | L | V | . |
. |
. |
. |
L | P | G | Q | G | H | F | G | Q | V | M | R | A | F | Q | E | S | G | F | V | E | R | V | R | R | H | L |
Template Known Secondary structure |   |
 |  |  |  |  |
| S | S |
| S |
|  |  |  |  |  |  |  |  |  |  | T | T |
|  |  |  |  |  | S | S | T | T | . | . | . | . | . | . | . | S |
| S | S |
| S |  |  |  | . | . | . | . |  |
|
|
| S |
|  |  |  |  |  |  | T | T | S | S | S |
| T |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
|
|  |  | . | . | . | . | . | . | . |  |  |  |
|
|
|  |  |  | . | . | . | . |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
4 | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | |
|
|
|
|
|
|
. | . | . | 40 | . | . | . | . | . | |
|
|
|
. | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . |
  |
  |   |
752 | . | . | . | . | . | . | . | 760 |
Predicted Secondary structure |   |
|
|
|
|
|  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
Query Sequence |   |
Y | P | S | L | V | L | I | G | F |
Query Conservation |   |
  |   |   |   |
|
|
|   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |
|
|
|
|
|
Template Sequence |   |
E | R | G | L | P | F | L | G | I |
Template Known Secondary structure |   |
 | T | T |
|
|  |  |  |
|
Template Predicted Secondary structure |   |
 |
|
|
|  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
  |   |
73 | . | . | . | . | . | . | 80 | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|