Return to main results Retrieve Phyre Job Id

Job DescriptionP39453
Confidence97.69%DateThu Jan 5 12:00:52 GMT 2012
Rank173Aligned Residues86
% Identity20%Templated1i5na_
SCOP infoFour-helical up-and-down bundle Histidine-containing phosphotransfer domain, HPT domain Chemotaxis protein CheA P1 domain
Resolution2.14

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   825....830.........840.........850... ......860.........870.........880.. .......890..
Predicted Secondary structure 


........

...





.
Query SS confidence 




























. . . . . . . .




























. . .









.
Query Sequence  IHEWLVLFTQHALPLLDEIDIARASQDSE. . . . . . . . KIKRAAHQLKSSCSSLGMHIASQLCAQLE. . . QQPLSAPLPH.
Query Conservation         
          
          ........      
 
 
     
   
      

...          .
Alig confidence 




























........




























...









.
Template Conservation    

   

 

 
 
  
   
  
     
      
 
  




 
   

  
  

  

  
  
        
Template Sequence  ISDFYQTFFDEADELLADXEQHLLDLVPESPDAEQLNAIFRAAHSIKGGAGTFGFTILQETTHLXENLLDEARRGEXQLN
Template Known Secondary structure  GGGG

TTS

TT
TTSS


Template Predicted Secondary structure 












Template SS confidence 















































































   5....10.........20.........30.........40.........50.........60.........70.........80....
 
   893......900.........910
Predicted Secondary structure  ....
Query SS confidence  . . . .

















Query Sequence  . . . . EEITRSVAALEAWLHKKD
Query Conservation  ....                  
Alig confidence  ....

















Template Conservation        
    
 
   
    
Template Sequence  TDIINLFLETKDIXQEQLDAYK
Template Known Secondary structure 
Template Predicted Secondary structure 
Template SS confidence 





















   85....90.........100......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions