Return to main results Retrieve Phyre Job Id

Job DescriptionP39453
Confidence99.92%DateThu Jan 5 12:00:52 GMT 2012
Rank15Aligned Residues145
% Identity21%Templated1gkza2
SCOP infoATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase alpha-ketoacid dehydrogenase kinase, C-terminal domain
Resolution2.2

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   516...520.........530......... 540.........550.........560.........570.........580 .....
Predicted Secondary structure 


.
















.........
Query SS confidence 























.








































. . . . . . . . .




Query Sequence  DEPFEPRPLLESTLQLMSGRVKGR. PIRLATAIADDMPCALMGDPRRIRQVITNLLSNALRFTDEG. . . . . . . . . YIILR
Query Conservation       
                  .                  
   
 


 

  

      
......... 
   
Alig confidence 























.








































.........




Template Conservation          

   
                
 
          
   
  

 


 


                
 
 
Template Sequence  CTRLSPKKIIEKWVDFARRLCEHKYGNAPRVRINGHVAARFPFIPMPLDYILPELLKNAMRATMESHLDTPYNVPDVVIT
Template Known Secondary structure 
S



STT



T
TT
TTS


Template Predicted Secondary structure 






















Template SS confidence 















































































   192.......200.........210.........220.........230.........240.........250.........260.........270.
 
   586...590.........600.........610.........620.........630.........640.........650.........660.
Predicted Secondary structure 






























Query SS confidence 











































































Query Sequence  SRTDGEQWLVEVEDSGCGIDPAKLAEIFQPFVQVSGKRGGTGLGLTISSRLAQAMGGELSATSTPEVGSCFCLRLP
Query Conservation             
 
 
 

       

  
        
 



 
         
 
   
    

 
   

Alig confidence 





































.




































Template Conservation           
 
 
 
 

       


   
     .
 



 
        

 
 
 
  
 

   
 
 
Template Sequence  IANNDVDLIIRISDRGGGIAHKDLDRVMDYHFTTAPMH. GFGFGLPTSRAYAEYLGGSLQLQSLQGIGTDVYLRLR
Template Known Secondary structure 
SS

S



TTTTTTTTSTT





S.
SS
TT
TTT
Template Predicted Secondary structure 















.









Template SS confidence 











































































   272.......280.........290.........300......... 310.........320.........330.........340......
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions