Return to main results Retrieve Phyre Job Id

Job DescriptionP39453
Confidence97.65%DateThu Jan 5 12:00:52 GMT 2012
Rank175Aligned Residues143
% Identity22%Templated1ei1a2
SCOP infoATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase DNA gyrase/MutL, N-terminal domain
Resolution2.30

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   552.......560 .........570....... ..580.........590.........600....... ..610.......
Predicted Secondary structure 




...

...











........


Query SS confidence 








. . .
















. . .





























. . . . . . . .









Query Sequence  PCALMGDPR. . . RIRQVITNLLSNALRFT. . . DEGYIILRSRTDGEQWLVEVEDSGCGIDPA. . . . . . . . KLAEIFQPFV
Query Conservation        
  ... 
 


 

  

    ...  
 
              
 
 
 

   ........    

  
 
Alig confidence 








...
















...













...












........









Template Conservation 
 

 
      

  

 


 




     

 
 
 
   
 ...
 
 


 

                     
Template Sequence  PGMYIGDTDDGTGLHHMVFEVVDNAIDEALAGHCKEIIVTIHADNS. . . VSVQDDGRGIPTGIHPEEGVSAAEVIMTVLH
Template Known Secondary structure  T

SSSSTT



TTS
...
SS



SB
TTTSSBSTT
Template Predicted Secondary structure 













...













Template SS confidence 















































































   23......30.........40.........50.........60........ .70.........80.........90.........
 
   618.620 .........630.........640.........650.........660.........670.........680......
Predicted Secondary structure 

........
































...
Query SS confidence 


. . . . . . . .

































































. . .
Query Sequence  QVS. . . . . . . . GKRGGTGLGLTISSRLAQAMGGELSATSTPEVGSCFCLRLPLRVATAPVPKTVNQAVRLDGLRLLL. . .
Query Conservation     ........    
 



 
         
 
   
    

 
   

                      

 ...
Alig confidence 


........










....















.






..
























...
Template Conservation              
 
  
 

 .... 
   
    
     .
      ..   
               

 
 
 

Template Sequence  AGGKFDDNSYKVSGGLHGVGVS. . . . VVNALSQKLELVIQRE. GKIHRQI. . YEHGVPQAPLAVTGETEKTGTMVRFWPS
Template Known Secondary structure 
SS
SSSSS
SS
S

SS
....TT.T..TTSS


S


Template Predicted Secondary structure 

















....


.

..











Template SS confidence 















































































   100.........110.........120. ........130....... ..140.... .....150.........160.........170..
 
   687..690.........700....
Predicted Secondary structure  ....




Query SS confidence  . . . .

















Query Sequence  . . . . IEDNPLTQRITIEMLKTS
Query Conservation  ....


           
   
Alig confidence  ....

















Template Conservation     
          
   
   
Template Sequence  LETFTNVTEFEYEILAKRLREL
Template Known Secondary structure  TTT

S

S

Template Predicted Secondary structure 




Template SS confidence 





















   173......180.........190....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions