 |
Job Description | P39453 | Confidence | 38.97% | Date | Thu Jan 5 12:00:52 GMT 2012 |
Rank | 424 | Aligned Residues | 93 |
% Identity | 12% | Template | d1dxea_ |
SCOP info | TIM beta/alpha-barrel
| Phosphoenolpyruvate/pyruvate domain
| HpcH/HpaI aldolase
|
Resolution | 1.8 |
|
 |
  |   |
708 | . | 710 | . | . | . | . | . | . | . | . | . | 720 | . | . | . | . | . | . | . | . | . | 730 | . | . | . | . | . | . | . | . | . | 740 | . | . | . | . | . | . | . | . | . | 750 | |
. | . | . | . | . | . | . | . | . | 760 | . | . | . | . | . | . | . | . | . | 770 | . | . | . | . | . | . | . | . | . | 780 | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  | . |  |
|
|
|
|
|  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
I | V | A | V | G | N | A | A | Q | A | L | E | T | L | Q | N | S | E | P | F | A | A | A | L | V | D | F | D | L | P | D | I | D | G | I | T | L | A | R | Q | L | A | Q | . |
Q | Y | P | S | L | V | L | I | G | F | S | A | H | V | I | D | E | T | L | R | Q | R | T | S | S | L | F | R | G | I | I | P | K | P | V | P |
Query Conservation |   |
|   |   |
|   |   |
|   |   |
|
|   |   |   |   |   |   |   |   |   |
|   |
|
|   |
|   |   |
|
|   |
|   |
|   |   |   |   |   |   |
|
|   | . |   |   |   |   |   |
|
|
|   |   |
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |
|   |
|
|   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |
|
|   |   |   |
|   |   |
|   |   |
| . |   |
|   |
|   |
|
|   |
|
|   |   |   |   |   |   |   |   |   |   |   |
|   |
|   |   |   |   |
|   |   |   |   |
|
|
|   |   |   |   |   |   |   |
|   |   |   |
|
|   |
|
|   |
|
|
|
|
|   |
|   |
Template Sequence |   |
C | W | S | A | L | S | N | P | I | S | T | E | V | L | G | L | A | G | . |
F | D | W | L | V | L | D | G | E | H | A | P | N | D | I | S | T | F | I | P | Q | L | M | A | L | K | G | S | A | S | A | P | V | V | R | V | P | T | N | E | P | V | I | I | K | R | L | L | D | I | G | F | Y | N | F | L | I | P | F | V | E |
Template Known Secondary structure |   |
 |  |  |
| S |
| S |  |  |  |  |  |  |  | T | T | S |
| . |
| S |  |  |  |  |  | S | S | S | S | S |
|
|  |  |  |  |  |  |  |  |  |  | T | T | T |
| S | S |  |  |  |  |  |
| S | S | S |
|  |  |  |  |  |  |  |  |  | T | T |
|
|  |  |  |  | S |
|
|
|
Template Predicted Secondary structure |   |
 |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |
|
| . |
|
|  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
23 | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | |
. | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . |
  |
  |   |
787 | . | . | 790 | . | . | . | . | . | . | . | . | . | 800 | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
R | E | V | L | G | Q | L | L | A | H | Y | L | Q | L | Q |
Query Conservation |   |
  |   |   |
|   |   |   |
|   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |
|   |
|   |   |   |   |   |   |   |   |
|   |
Template Sequence |   |
T | K | E | E | A | E | L | A | V | A | S | T | R | Y | P |
Template Known Secondary structure |   |
S |  |  |  |  |  |  |  |  |  | T | T | S |
| T |
Template Predicted Secondary structure |   |
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
102 | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|