Return to main results Retrieve Phyre Job Id

Job DescriptionP39453
Confidence96.73%DateThu Jan 5 12:00:52 GMT 2012
Rank195Aligned Residues113
% Identity13%Templated1ccwa_
SCOP infoFlavodoxin-like Cobalamin (vitamin B12)-binding domain Cobalamin (vitamin B12)-binding domain
Resolution1.60

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   688.690.........700......... 710.........720.........730......... 740.........750.........760..
Predicted Secondary structure 








...














..






Query SS confidence 





















. . .





























. .






















Query Sequence  EDNPLTQRITIEMLKTSGAQIV. . . AVGNAAQALETLQNSEPFAAALVDFDLPDI. . DGITLARQLAQQYPSLVLIGFSA
Query Conservation 

           
   
  
 ... 
  
  

         
 

 
  

 
.. 
      

      


  

Alig confidence 





















...
















.











..






















Template Conservation 
 
 

   
   
   
  
  

     
           .
 
 

            

  

        
 


Template Sequence  DCHAVGNKILDHAFTNAGFNVVNIGVLSPQELFIKAAIETKA. DAILVSSLYGQGEIDCKGLRQKCDEAGLEGILLYVGG
Template Known Secondary structure 



TT

T
.S
SSTTTTT
TT
Template Predicted Secondary structure 












.













Template SS confidence 















































































   14.....20.........30.........40.........50..... ....60.........70.........80.........90..
 
   763......770.........780.........790.........800.
Predicted Secondary structure  ......














Query SS confidence  . . . . . .






































Query Sequence  . . . . . . HVIDETLRQRTSSLFRGIIPKPVPREVLGQLLAHYLQLQ
Query Conservation  ......             
    
 

     
   
       
Alig confidence  ......






































Template Conservation                 
   
 
 

  
   
     

  
   
Template Sequence  NIVVGKQHWPDVEKRFKDMGYDRVYAPGTPPEVGIADLKKDLNIE
Template Known Secondary structure  S
SSSS

TT
S

TT

T

Template Predicted Secondary structure 



















Template SS confidence 












































   93......100.........110.........120.........130.......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions