Return to main results Retrieve Phyre Job Id

Job DescriptionP39453
Confidence38.69%DateThu Jan 5 12:00:52 GMT 2012
Rank428Aligned Residues85
% Identity14%Templatec3qc3B_
PDB info PDB header:isomeraseChain: B: PDB Molecule:d-ribulose-5-phosphate-3-epimerase; PDBTitle: crystal structure of a d-ribulose-5-phosphate-3-epimerase (np_954699)2 from homo sapiens at 2.20 a resolution
Resolution2.20 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   712.......720.........730..... .... 740.........750........ .760.........770.........780....
Predicted Secondary structure 








....



.





..









Query SS confidence 























. . . .



.


















. .

























Query Sequence  GNAAQALETLQNSEPFAAALVDFD. . . . LPDI. DGITLARQLAQQYPSLVLI. . GFSAHVIDETLRQRTSSLFRGIIPKP
Query Conservation    
  

         
 

 
  ....

 
. 
      

      


..  

             
    
 

Alig confidence 













.








....



.


















..

























Template Conservation    
   
      
.   
 


 
  
      
   
  
        
             
     



 
 

 
Template Sequence  ANLGAECLRXLDSG. ADYLHLDVXDGHFVPNITFGHPVVESLRKQLGQDPFFDXHXXVSKPEQWVKPXAVAGANQYTFHL
Template Known Secondary structure  GGTT.
S
BSSSSS
B



SSS

S
T
SG
Template Predicted Secondary structure 

.































Template SS confidence 















































































   17..20.........30 .........40.........50.........60.........70.........80.........90.....
 
   785....790.......
Predicted Secondary structure 

Query SS confidence 












Query Sequence  VPREVLGQLLAHY
Query Conservation       
   
   
Alig confidence 












Template Conservation               
Template Sequence  EATENPGALIKDI
Template Known Secondary structure  GG
S
Template Predicted Secondary structure 




Template SS confidence 












   96...100........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions