Job Description P39453 Confidence 99.52% Date Thu Jan 5 12:00:52 GMT 2012 Rank 142 Aligned Residues 223 % Identity 26% Template c3i9yA_ PDB info PDB header:transferase Chain: A: PDB Molecule:sensor protein; PDBTitle: crystal structure of the v. parahaemolyticus histidine2 kinase sensor tors sensor domain Resolution 2.16 Å

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		48	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.				.	.	.	.	.	.	120	.	.	.	.
Predicted Secondary structure																																																																				.	.	.
Query SS confidence																																																																				.	.	.
Query Sequence		T	M	N	M	A	R	Q	L	S	E	A	S	A	W	E	L	F	A	A	Q	N	L	T	S	A	D	N	E	K	M	W	Q	A	Q	G	R	M	L	T	A	Q	S	L	K	I	N	A	L	L	Q	A	L	R	E	Q	G	F	D	T	T	A	I	E	Q	Q	E	.	.	.	Q	E	I	S	R	S	L	R	Q	Q	G
Query Conservation																																																																				.	.	.
Alig confidence																																																																				.	.	.
Template Conservation
Template Sequence		A	M	I	E	A	R	Q	V	S	E	L	S	T	R	I	I	S	S	V	Q	M	L	S	N	A	Q	N	E	Q	E	R	K	E	A	G	R	V	L	F	E	Q	L	E	S	L	L	T	H	I	K	E	L	G	G	E	S	F	D	S	K	L	L	D	A	L	E	S	N	V	Q	N	V	I	N	N	L	A	E	L	G
Template Known Secondary structure																									T			S																												T
Template Predicted Secondary structure
Template SS confidence
		51	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130
		125	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	L	V	G	Q	R	L	Q	L	R	Q	Q	Q	Q	Q	L	S	Q	Q	I	V	A	A	A	D	E	I	A	R	L	A	Q	G	Q	A	N	N	A	T	T	S	A	G	A	T	Q	A	G	I	Y	D	L	I	E	Q	D	Q	R	Q	A	A	E	S	A	L	D	R	L	I	D	I	D	L	E	Y	V	N	Q	M	N
Query Conservation
Alig confidence																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		V	T	V	E	R	K	L	W	L	A	K	E	I	D	T	R	V	E	E	M	R	L	L	S	E	E	L	E	Q	L	T	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	L	D	L	T	E	R	L	H
Template Known Secondary structure																																T		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		131	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.																																								.	.	.	.	.	.	.	170	.
		205	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	L	R	L	S	A	L	R	V	Q	Q	M	V	M	N	L	G	L	E	Q	I	Q	K	N	A	P	T	L	E	K	Q	L	N	N	A	V	K	I	L	Q	R	R	Q	I	R	I	E	D	P	G	V	R	A	Q	V	A	T	T	L	T	T	V	S	Q	Y	S	D	L	L	A	L	Y	Q	Q	D	S	E	I	S	N
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	L	H	L	L	A	F	K	M	L	N	Q	I	E	E	A	R	T	L	T	N	V	D	R	I	Q	Q	I	Q	T	A	F	E	N	N	L	K	I	M	K	R	R	V	L	A	V	E	D	P	T	R	S	K	Q	M	S	Q	L	L	T	E	L	G	K	R	Q	V	V	F	T	I	L	L	Q	Q	Y	E	N	N	E
Template Known Secondary structure																		T	T																											T			S																	G	G	G
Template Predicted Secondary structure
Template SS confidence
		211	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290
		285	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	L	Q	T	L	A	Q	N	N	I	A	Q	F	A	Q	F	S	S	E	V	S	Q	L	V	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Q	S	Q	Q	L	M	Q	K	T	L	E	L	F	S	E	L	N	S	T	V	N	K	L	V	D
Template Known Secondary structure																									T
Template Predicted Secondary structure
Template SS confidence
		291	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions