Job Description P39453 Confidence 38.27% Date Thu Jan 5 12:00:52 GMT 2012 Rank 433 Aligned Residues 136 % Identity 20% Template c3dkpA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:probable atp-dependent rna helicase ddx52; PDBTitle: human dead-box rna-helicase ddx52, conserved domain i in complex with2 adp Resolution 2.10 Å

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		641	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720
Predicted Secondary structure
Query SS confidence
Query Sequence		G	G	E	L	S	A	T	S	T	P	E	V	G	S	C	F	C	L	R	L	P	L	R	V	A	T	A	P	V	P	K	T	V	N	Q	A	V	R	L	D	G	L	R	L	L	L	I	E	D	N	P	L	T	Q	R	I	T	I	E	M	L	K	T	S	G	A	Q	I	V	A	V	G	N	A	A	Q	A	L	E	T
Query Conservation
Alig confidence																																																	.	.	.	.
Template Conservation																																																	.	.	.	.
Template Sequence		G	R	E	L	L	A	S	A	P	T	G	S	G	K	T	L	A	F	S	I	P	I	L	M	Q	L	K	Q	P	A	N	K	G	F	R	A	L	I	I	S	P	T	R	E	L	A	S	.	.	.	.	Q	I	H	R	E	L	I	K	I	S	E	G	T	G	F	R	I	H	M	I	H	K	A	A	V	A	A	K	K
Template Known Secondary structure		T									T	T	S																S			S	S	S								S	S						.	.	.	.										T	T	T	S															T	T
Template Predicted Secondary structure																																																	.	.	.	.
Template SS confidence
		202	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.					.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.
		721	.	.	.	.	.																													.	.	.	730	.	.	.				.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.			.	.	.	.	.	.	.	760	.	.	.	.	.	.	.
Predicted Secondary structure								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								.	.	.																				.	.
Query SS confidence								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								.	.	.																				.	.
Query Sequence		L	Q	N	S	E	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	F	A	A	A	L	V	D	.	.	.	F	D	L	P	D	I	D	G	I	T	L	A	R	Q	L	A	Q	Q	Y	.	.	P	S	L	V	L	I	G	F	S	A	H	V	I	D	E
Query Conservation								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								.	.	.																				.	.
Alig confidence								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								.	.	.																				.	.
Template Conservation
Template Sequence		F	G	P	K	S	S	K	K	F	D	I	L	V	T	T	P	N	R	L	I	Y	L	L	K	Q	D	P	P	G	I	D	L	A	S	V	E	W	L	V	V	D	E	S	D	K	L	F	E	D	G	G	F	R	D	Q	L	A	S	I	F	L	A	C	T	S	H	K	V	R	R	A	M	F	S	A	T	F	A	Y	D
Template Known Secondary structure		T	S	T	T	S																				S	S	S		S				T	T							S	S																								T	T								S	S
Template Predicted Secondary structure
Template SS confidence
		278	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.
		768	.	770	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	L	R	Q	R	T	S	S	L	F	R	G	I	I	P	K	P	V
Query Conservation
Alig confidence									.	.	.	.	.
Template Conservation									.	.	.	.	.
Template Sequence		V	E	Q	W	C	K	L	.	.	.	.	.	N	L	D	N	V	I
Template Known Secondary structure									.	.	.	.	.		S	S	S
Template Predicted Secondary structure									.	.	.	.	.
Template SS confidence
		360	.	.	.	.	.	.						.	.	.	370	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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