Job Description P39453 Confidence 99.53% Date Thu Jan 5 12:00:52 GMT 2012 Rank 141 Aligned Residues 180 % Identity 20% Template c3c3wB_ PDB info PDB header:transcription Chain: B: PDB Molecule:two component transcriptional regulatory protein devr; PDBTitle: crystal structure of the mycobacterium tuberculosis hypoxic response2 regulator dosr Resolution 2.20 Å

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		683	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.			.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760
Predicted Secondary structure																											.	.
Query SS confidence																											.	.
Query Sequence		R	L	L	L	I	E	D	N	P	L	T	Q	R	I	T	I	E	M	L	K	T	S	G	A	Q	.	.	I	V	A	V	G	N	A	A	Q	A	L	E	T	L	Q	N	S	E	P	F	A	A	A	L	V	D	F	D	L	P	D	I	D	G	I	T	L	A	R	Q	L	A	Q	Q	Y	P	S	L	V	L	I	G	F
Query Conservation																											.	.
Alig confidence																											.	.																				.
Template Conservation																																																.
Template Sequence		K	V	F	L	V	D	D	H	E	V	V	R	R	G	L	V	D	L	L	G	A	D	P	E	L	D	V	V	G	E	A	G	S	V	A	E	A	M	A	R	V	P	A	A	R	P	.	D	V	A	V	L	D	V	R	L	P	D	G	N	G	I	E	L	C	R	D	L	L	S	R	M	P	D	L	R	C	L	I	L
Template Known Secondary structure								S														T		T	T								S	S														.	S						S			T	T														S	T	T						G
Template Predicted Secondary structure																																																.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.		.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
		761	.	.	.	.	.	.	.	.	770	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.																									.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.
Predicted Secondary structure																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		S	A	H	V	I	D	E	T	L	R	Q	R	T	S	S	L	F	R	G	I	I	P	K	P	V	P	R	E	V	L	G	Q	L	L	A	H	Y	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Q	L	Q	V	N	N	D	Q	S	L	D	V	S	Q	L	N	E	D
Query Conservation																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		T	S	Y	T	S	D	E	A	M	L	D	A	I	L	A	G	A	S	G	Y	V	V	K	D	I	K	G	M	E	L	A	R	A	V	K	D	V	G	A	G	R	S	L	L	D	N	R	A	A	A	A	L	M	A	K	L	R	G	A	A	E	K	Q	D	P	L	S	G	L	T	D	Q	E	R	T	L	L	G	L	L
Template Known Secondary structure		G	G	S	S	S											T																									G	G	G	S																			S		T	T	T	T	S
Template Predicted Secondary structure
Template SS confidence
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
		817	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840	.	.	.	.	.	.	.	.	.	850	.	.	.	.	.	.	.	.	.	860	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	Q	L	M	G	T	E	K	I	H	E	W	L	V	L	F	T	Q	H	A	L	P	L	L	D	E	I	D	I	A	R	A	S	Q	D	S	E	K	I	K	R	A	A	H	Q	L	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	E	G	L	T	N	K	Q	I	A	D	R	M	F	L	A	E	K	T	V	K	N	Y	V	S	R	L	L	A	K	L	G	M	E	R	R	T	Q	A	A	V	F	A	T	E	L	K
Template Known Secondary structure		T	T	T											T																	T	T			S	S											T
Template Predicted Secondary structure
Template SS confidence
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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