Job Description P39453 Confidence 58.52% Date Thu Jan 5 12:00:52 GMT 2012 Rank 326 Aligned Residues 102 % Identity 10% Template c3bwbA_ PDB info PDB header:transferase Chain: A: PDB Molecule:spermidine synthase; PDBTitle: crystal structure of the apo form of spermidine synthase from2 trypanosoma cruzi at 2.5 a resolution Resolution 2.50 Å

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		678	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.							.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.			.	.	740	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																.	.	.	.	.	.																															.	.
Query SS confidence																																.	.	.	.	.	.																															.	.
Query Sequence		R	L	D	G	L	R	L	L	L	I	E	D	N	P	L	T	Q	R	I	T	I	E	M	L	K	T	S	G	A	Q	.	.	.	.	.	.	I	V	A	V	G	N	A	A	Q	A	L	E	T	L	Q	N	S	E	P	F	A	A	A	L	V	D	F	D	L	P	.	.	D	I	D	G	I	T	L	A	R	Q	L	A
Query Conservation																																.	.	.	.	.	.																															.	.
Alig confidence																																.	.	.	.	.	.																			.												.	.
Template Conservation																																																								.
Template Sequence		H	G	T	V	E	H	C	D	L	V	D	I	D	G	E	V	X	E	Q	S	K	Q	H	F	P	Q	I	S	R	S	L	A	D	P	R	A	T	V	R	V	G	D	G	L	A	F	V	R	Q	T	P	D	N	T	.	Y	D	V	V	I	I	D	T	T	D	P	A	S	K	L	F	G	E	A	F	Y	K	D	V	L
Template Known Secondary structure			T	T									S																	G	G	G	G		T	T						S								T	S		T	T		.									S						S	S
Template Predicted Secondary structure																																																								.
Template SS confidence
		116	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.		170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.
		750	.	.	.	.	.	.	.	.	.	760	.	.	.	.								.	.	.	.	.	770	.	.	.	.	.	.	.	.	.	780
Predicted Secondary structure																	.	.	.	.	.	.	.
Query SS confidence																	.	.	.	.	.	.	.
Query Sequence		Q	Q	Y	P	S	L	V	L	I	G	F	S	A	H	V	.	.	.	.	.	.	.	I	D	E	T	L	R	Q	R	T	S	S	L	F	R	G	I
Query Conservation																	.	.	.	.	.	.	.
Alig confidence																	.	.	.	.	.	.	.
Template Conservation
Template Sequence		R	I	L	K	P	D	G	I	C	C	N	Q	G	E	S	I	W	L	D	L	E	L	I	E	K	X	S	R	F	I	R	E	T	G	F	A	S	V
Template Known Secondary structure																	T	T	T																T		S
Template Predicted Secondary structure
Template SS confidence
		198	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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