 |
Job Description | P39453 | Confidence | 43.70% | Date | Thu Jan 5 12:00:52 GMT 2012 |
Rank | 401 | Aligned Residues | 86 |
% Identity | 8% | Template | c3bw2A_ |
PDB info |
PDB header:oxidoreductase | Chain: A: PDB Molecule:2-nitropropane dioxygenase; |
PDBTitle: crystal structures and site-directed mutagenesis study of nitroalkane2 oxidase from streptomyces ansochromogenes
|
Resolution | 2.10 Å |
|
 |
  |   |
694 | . | . | . | . | . | 700 | . | . | . | . | . | . | . | . | . | 710 | . | . | . | . | . | . | . | . | . | 720 | . | . | . | . | . | . | . | . | . | 730 | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
. | . | . | . | . | 740 | . | . | . | . | . | . | . | . | . | 750 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
Q | R | I | T | I | E | M | L | K | T | S | G | A | Q | I | V | A | V | G | N | A | A | Q | A | L | E | T | L | Q | N | S | E | P | F | A | A | A | L | V | D | F | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
D | L | P | D | I | D | G | I | T | L | A | R | Q | L | A | Q | Q | Y | P | S | L | V | L |
Query Conservation |   |
  |   |   |   |   |   |   |
|   |   |   |
|   |   |
|   |   |
|   |   |
|   |   |
|
|   |   |   |   |   |   |   |   |   |
|   |
|
|   |
|   | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |   |
|
|   |
|   |
|   |   |   |   |   |   |
|
|   |   |   |   |   |   |
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
Template Conservation |   |
  |   |   |
|   |   |
|   |   |   |   |   |   |
|   |   |   |
|   |
|   |   |   |
|   |   |
|   |   |
|
| . | . |
|
|   |
|
|
|   |
|   |
|
|
|
|
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|   |   |
|   |   |   |   | . |   |
|
|
|
Template Sequence |   |
R | E | V | I | A | R | L | R | R | A | G | T | L | T | L | V | T | A | T | T | P | E | E | A | R | A | V | E | A | A | G | . |
. |
A | D | A | V | I | A | Q | G | V | E | A | G | G | H | Q | G | T | H | R | D | S | S | E | D | D | G | A | G | I | G | L | L | S | L | L | A | Q | V | R | E | A | V | . |
D | I | P | V |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  | T | T |
|  |  |  |  |  |  | S | S |  |  |  |  |  |  |  |  |  | T | T | . | . |
| S |  |  |  |  |  |
| T | T |
| S |  |  |
|
|
| S | S |
|
| G | G | G | T | T |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
| . | S | S |
|  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
| . | . |
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
| . |
|
|  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
135 | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | |
|
. | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | |
. | . | 210 | . |
  |
  |   |
758 | . | 760 | . | . | . | . | . | . | . | . | . | 770 | . | . | . | . | . | . | . | . | . | 780 | . | . |
Predicted Secondary structure |   |
 |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
I | G | F | S | A | H | V | I | D | E | T | L | R | Q | R | T | S | S | L | F | R | G | I | I | P |
Query Conservation |   |
|   |   |
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|
|
|
|
|   |   |
|   |
|
|
|   |
|
|
|
|
|
|
|   |
|   |
|
Template Sequence |   |
V | A | A | G | G | I | M | R | G | G | Q | I | A | A | V | L | A | A | G | A | D | A | A | Q | L |
Template Known Secondary structure |   |
 |  |  | S | S |
|
| S |  |  |  |  |  |  |  |  |  | T | T |
| S |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
212 | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|