Job Description P39453 Confidence 43.04% Date Thu Jan 5 12:00:52 GMT 2012 Rank 404 Aligned Residues 77 % Identity 14% Template c3axtA_ PDB info PDB header:transferase Chain: A: PDB Molecule:probable n(2),n(2)-dimethylguanosine trna methyltransferase PDBTitle: complex structure of trna methyltransferase trm1 from aquifex aeolicus2 with s-adenosyl-l-methionine Resolution 2.49 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		683	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.				.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																										.	.	.
Query SS confidence																										.	.	.
Query Sequence		R	L	L	L	I	E	D	N	P	L	T	Q	R	I	T	I	E	M	L	K	T	S	G	A	.	.	.	Q	I	V	A	V	G	N	A	A	Q	A	L	E	T	L	Q	N	S	E	P	F	A	A	A	L	V	D	F	D	L	P	D	I	D	G	I	T	L	A	R	Q	L	A	Q	Q	Y	P	S	L	V	L	I	G
Query Conservation																										.	.	.
Alig confidence																										.	.	.																												.	.	.
Template Conservation																																																								.	.	.
Template Sequence		K	A	Y	A	N	D	I	S	S	K	A	I	E	I	M	K	E	N	F	K	L	N	N	I	P	E	D	R	Y	E	I	H	G	M	E	A	N	F	F	L	R	K	E	W	G	F	G	F	D	Y	V	D	L	D	.	.	.	P	F	G	T	P	V	P	F	I	E	S	V	A	L	S	M	K	R	G	G	I	L	S
Template Known Secondary structure								S															T	T			G	G	G						S							T	S			S	S									.	.	.		S	S
Template Predicted Secondary structure																																																								.	.	.
Template SS confidence
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.				.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.
		760	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	S	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	T	A
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		156	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions