Job Description P39453 Confidence 32.98% Date Thu Jan 5 12:00:52 GMT 2012 Rank 468 Aligned Residues 89 % Identity 16% Template c2yv4A_ PDB info PDB header:rna binding protein Chain: A: PDB Molecule:hypothetical protein ph0435; PDBTitle: crystal structure of c-terminal sua5 domain from pyrococcus horikoshii2 hypothetical sua5 protein ph0435 Resolution 2.00 Å

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		548	.	550	.	.	.		.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.
Predicted Secondary structure								.																																																																							.	.	.
Query SS confidence								.																																																																							.	.	.
Query Sequence		A	D	D	M	P	C	.	A	L	M	G	D	P	R	R	I	R	Q	V	I	T	N	L	L	S	N	A	L	R	F	T	D	E	G	Y	I	I	L	R	S	R	T	D	G	E	Q	W	L	V	E	V	E	D	S	G	C	G	I	D	P	A	K	L	A	E	I	F	Q	P	F	V	Q	V	S	G	K	R	.	.	.
Query Conservation								.																																																																							.	.	.
Alig confidence								.																							.	.																								.	.	.																					.	.	.
Template Conservation																															.	.																								.	.	.
Template Sequence		A	P	N	A	E	V	I	V	V	E	G	P	R	E	K	V	K	G	K	I	T	E	L	V	K	E	L	K	E	.	.	R	G	K	K	V	G	V	I	G	S	E	S	Y	N	A	D	E	F	F	F	L	G	S	.	.	.	S	V	E	E	V	A	K	N	L	F	K	A	L	R	Y	X	D	K	A	G	V	D	V
Template Known Secondary structure				S	S																										.	.	T	T								S	S		T	T		S							S	.	.	.	S																		T	T		S
Template Predicted Secondary structure																															.	.																								.	.	.
Template SS confidence
		236	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.			.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.				.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310
								624	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	G	G	T	G	L	G	L	T	I	S	S	R	L	A	Q	A	M	G	G	E	L
Query Conservation		.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.														.	.	.
Template Conservation																					.	.	.
Template Sequence		V	I	A	E	G	V	E	E	R	G	L	G	L	A	V	X	N	R	L	.	.	.	S	G	Y	K	I
Template Known Secondary structure								S	G	G	G										.	.	.
Template Predicted Secondary structure																					.	.	.
Template SS confidence
		311	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.				330	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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