Job Description P39453 Confidence 100.00% Date Thu Jan 5 12:00:52 GMT 2012 Rank 4 Aligned Residues 252 % Identity 17% Template c2q8fA_ PDB info PDB header:transferase Chain: A: PDB Molecule:[pyruvate dehydrogenase [lipoamide]] kinase isozyme 1; PDBTitle: structure of pyruvate dehydrogenase kinase isoform 1 Resolution 2.03 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		415	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470							.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																										.	.	.	.	.	.
Query SS confidence																																																										.	.	.	.	.	.
Query Sequence		Q	V	K	A	R	T	A	E	L	Q	E	L	V	I	E	H	R	Q	A	R	A	E	A	E	K	A	S	Q	A	K	S	A	F	L	A	A	M	S	H	E	I	R	T	P	L	Y	G	I	L	G	T	A	Q	L	L	A	.	.	.	.	.	.	D	N	P	A	L	N	A	Q	R	D	D	L	R	A	I	T	D	S
Query Conservation																																																										.	.	.	.	.	.
Alig confidence																																																										.	.	.	.	.	.
Template Conservation
Template Sequence		S	V	Q	L	V	Q	S	W	Y	I	Q	S	L	Q	E	L	L	D	F	K	D	K	S	A	E	D	A	K	A	I	Y	D	F	T	D	T	V	I	R	I	R	N	R	H	N	D	V	I	P	T	M	A	Q	G	V	I	E	Y	K	E	S	F	D	P	V	T	S	Q	N	V	Q	Y	F	L	D	R	F	Y	M	S
Template Known Secondary structure																		G	G	G	T	T	S		T	T																			T	T	T
Template Predicted Secondary structure
Template SS confidence
		106	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.
		489	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.								.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.
Predicted Secondary structure																																																				.	.	.	.	.	.	.
Query SS confidence																																																				.	.	.	.	.	.	.
Query Sequence		G	E	S	L	L	T	I	L	N	D	I	L	D	Y	S	A	I	E	A	G	G	K	N	V	S	V	S	D	E	P	F	E	P	R	P	L	L	E	S	T	L	Q	L	M	S	G	R	V	K	G	.	.	.	.	.	.	.	R	P	I	R	L	A	T	A	I	A	D	D	M	P	C	A	L	M	G	D	P	R	R
Query Conservation																																																				.	.	.	.	.	.	.
Alig confidence																		.	.	.	.	.	.																													.	.	.	.	.	.	.
Template Conservation																		.	.	.	.	.	.
Template Sequence		R	I	S	I	R	M	L	L	N	Q	H	S	L	L	F	G	.	.	.	.	.	.	H	I	G	S	I	N	P	N	C	N	V	L	E	V	I	K	D	G	Y	E	N	A	R	R	L	C	D	L	Y	Y	I	N	S	P	E	L	E	L	E	E	L	N	A	K	S	P	G	Q	P	I	Q	V	V	Y	V	P	S	H
Template Known Secondary structure																		.	.	.	.	.	.		B	T	T	B																										S												S	S	S	T	T	S
Template Predicted Secondary structure																		.	.	.	.	.	.
Template SS confidence
		188	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.							.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.
		562	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.									.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.
Predicted Secondary structure																		.	.	.	.	.	.	.	.																																																.	.	.	.	.	.	.	.	.
Query SS confidence																		.	.	.	.	.	.	.	.																																																.	.	.	.	.	.	.	.	.
Query Sequence		I	R	Q	V	I	T	N	L	L	S	N	A	L	R	F	T	.	.	.	.	.	.	.	.	D	E	G	Y	I	I	L	R	S	R	T	D	G	E	Q	W	L	V	E	V	E	D	S	G	C	G	I	D	P	A	K	L	A	E	I	F	Q	P	F	V	Q	V	S	G	K	R	G	.	.	.	.	.	.	.	.	.
Query Conservation																		.	.	.	.	.	.	.	.																																																.	.	.	.	.	.	.	.	.
Alig confidence																		.	.	.	.	.	.	.	.																																																.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	Y	H	M	V	F	E	L	F	K	N	A	M	R	A	T	M	E	H	H	A	N	R	G	V	Y	P	P	I	Q	V	H	V	T	L	G	N	E	D	L	T	V	K	M	S	D	R	G	G	G	V	P	L	R	K	I	D	R	L	F	N	Y	M	Y	S	T	A	P	R	P	R	V	E	T	S	R	A	V	P	L
Template Known Secondary structure																					S	T	T	T	T													S	S										S									G	G	G	G		T	T	T	T							S	S			S				S
Template Predicted Secondary structure
Template SS confidence
		273	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.
			625	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.
Predicted Secondary structure		.
Query SS confidence		.
Query Sequence		.	G	T	G	L	G	L	T	I	S	S	R	L	A	Q	A	M	G	G	E	L	S	A	T	S	T	P	E	V	G	S	C	F	C	L	R	L	P	L	R	V	A	T	A	P	V	P	K	T
Query Conservation		.
Alig confidence		.
Template Conservation
Template Sequence		A	G	F	G	Y	G	L	P	I	S	R	L	Y	A	Q	Y	F	Q	G	D	L	K	L	Y	S	L	E	G	Y	G	T	D	A	V	I	Y	I	K	A	L	S	T	D	S	I	E	R	L	P
Template Known Secondary structure		S		T	T													T	T									T	T	T										S	S	T	T	T		B
Template Predicted Secondary structure
Template SS confidence
		353	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions