Job Description P39453 Confidence 63.29% Date Thu Jan 5 12:00:52 GMT 2012 Rank 307 Aligned Residues 84 % Identity 11% Template c2q41D_ PDB info PDB header:transferase Chain: D: PDB Molecule:spermidine synthase 1; PDBTitle: ensemble refinement of the protein crystal structure of spermidine2 synthase from arabidopsis thaliana gene at1g23820 Resolution 2.70 Å

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		678	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.							.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.						.	.	.	.	.
Predicted Secondary structure																															.	.	.	.	.	.																																				.	.	.	.	.
Query SS confidence																															.	.	.	.	.	.																																				.	.	.	.	.
Query Sequence		R	L	D	G	L	R	L	L	L	I	E	D	N	P	L	T	Q	R	I	T	I	E	M	L	K	T	S	G	A	.	.	.	.	.	.	Q	I	V	A	V	G	N	A	A	Q	A	L	E	T	L	Q	N	S	E	P	F	A	A	A	L	V	D	F	D	L	P	D	I	D	G	.	.	.	.	.	I	T	L	A	R
Query Conservation																															.	.	.	.	.	.																																				.	.	.	.	.
Alig confidence																															.	.	.	.	.	.																				.																.	.	.	.	.
Template Conservation																																																								.
Template Sequence		H	A	S	I	E	Q	I	D	X	C	E	I	D	K	X	V	V	D	V	S	K	Q	F	F	P	D	V	A	I	G	Y	E	D	P	R	V	N	L	V	I	G	D	G	V	A	F	L	K	N	A	A	E	G	S	.	Y	D	A	V	I	V	D	S	S	D	P	I	G	P	A	K	E	L	F	E	K	P	F	F	Q
Template Known Secondary structure			T	T																						T	T	T	G	G	G	T	T		T	T						S								S	S		S	S		.											S	S	S	G	G	G	G	G	G	S
Template Predicted Secondary structure																																																								.
Template SS confidence
		141	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.		.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.
		747	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	L	A	Q	Q	Y	P	S	L	V	L	I	G	F	S	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	V	A	R	A	L	R	P	G	G	V	V	C	T	Q	A
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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