Job Description P39453 Confidence 43.62% Date Thu Jan 5 12:00:52 GMT 2012 Rank 403 Aligned Residues 137 % Identity 17% Template c2pl3A_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:probable atp-dependent rna helicase ddx10; PDBTitle: human dead-box rna helicase ddx10, dead domain in complex with adp Resolution 2.15 Å

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		639	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.					.	.	.	.	.	710	.	.	.	.
Predicted Secondary structure																																																																				.	.	.	.
Query SS confidence																																																																				.	.	.	.
Query Sequence		A	M	G	G	E	L	S	A	T	S	T	P	E	V	G	S	C	F	C	L	R	L	P	L	R	V	A	T	A	P	V	P	K	T	V	N	Q	A	V	R	L	D	G	L	R	L	L	L	I	E	D	N	P	L	T	Q	R	I	T	I	E	M	L	K	T	S	.	.	.	.	G	A	Q	I	V	A	V	G	N	A
Query Conservation																																																																				.	.	.	.
Alig confidence																																				.	.	.	.	.																												.	.	.	.
Template Conservation																																				.	.	.	.	.
Template Sequence		L	Q	G	K	D	V	L	G	A	A	K	T	G	S	G	K	T	L	A	F	L	V	P	V	L	E	A	L	Y	R	L	Q	W	T	.	.	.	.	.	S	T	D	G	L	G	V	L	I	I	S	P	T	R	E	L	A	Y	Q	T	F	E	V	L	R	K	V	G	K	N	H	D	F	S	A	G	L	I	I	G	G
Template Known Secondary structure			T	T									T	T	S																	T	T			.	.	.	.	.	G	G	G									S	S															T	T	T	S	S
Template Predicted Secondary structure																																				.	.	.	.	.
Template SS confidence
		104	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.						.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.
		715	.	.	.	.	720	.	.	.	.	.	.																								.	.	.	730	.	.	.			.	.	.	.	.	.	740		.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.
Predicted Secondary structure														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								.	.								.
Query SS confidence														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								.	.								.
Query Sequence		A	Q	A	L	E	T	L	Q	N	S	E	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	F	A	A	A	L	V	D	.	.	F	D	L	P	D	I	D	.	G	I	T	L	A	R	Q	L	A	Q	Q	Y	P	S	L	V	L	I	G	F	S	A	H	V	I	D	E	T
Query Conservation														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								.	.								.
Alig confidence														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								.	.								.
Template Conservation
Template Sequence		L	K	H	E	A	E	R	I	N	N	I	N	I	L	V	C	T	P	G	R	L	L	Q	H	M	D	E	T	V	S	F	H	A	T	D	L	Q	M	L	V	L	D	E	A	D	R	I	L	D	M	G	F	A	D	T	M	N	A	V	I	E	N	L	P	K	K	R	Q	T	L	L	F	S	A	T	Q	T	K	S	V
Template Known Secondary structure										T	T		S																	S	S				T	T							T	T							T	T	T										T	S		T	T	S							S	S
Template Predicted Secondary structure
Template SS confidence
		181	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260
		769	770	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	R	Q	R	T	S	S	L	F	R	G	I	I	P	K	P	V
Query Conservation
Alig confidence								.	.	.	.	.
Template Conservation								.	.	.	.	.
Template Sequence		K	D	L	A	R	L	.	.	.	.	.	S	L	K	N	P	E
Template Known Secondary structure								.	.	.	.	.	S		S	S
Template Predicted Secondary structure								.	.	.	.	.
Template SS confidence
		261	.	.	.	.	.						.	.	.	270	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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