Job Description P39453 Confidence 47.53% Date Thu Jan 5 12:00:52 GMT 2012 Rank 385 Aligned Residues 81 % Identity 10% Template c2hteB_ PDB info PDB header:transferase Chain: B: PDB Molecule:spermidine synthase; PDBTitle: the crystal structure of spermidine synthase from p. falciparum in2 complex with 5'-methylthioadenosine Resolution 2.00 Å

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		678	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.							.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.
Predicted Secondary structure																																	.	.	.	.	.	.
Query SS confidence																																	.	.	.	.	.	.
Query Sequence		R	L	D	G	L	R	L	L	L	I	E	D	N	P	L	T	Q	R	I	T	I	E	M	L	K	T	S	G	A	Q	I	.	.	.	.	.	.	V	A	V	G	N	A	A	Q	A	L	E	T	L	Q	N	S	E	P	F	A	A	A	L	V	D	F	D	L	P	D	I	D	G	I	T	L	A	R	Q	L	A	Q	Q
Query Conservation																																	.	.	.	.	.	.
Alig confidence																																	.	.	.	.	.	.												.	.																	.	.	.	.
Template Conservation																																																		.	.																	.	.	.	.
Template Sequence		Y	K	S	V	E	N	I	D	I	C	E	I	D	E	T	V	I	E	V	S	K	I	Y	F	K	N	I	S	C	G	Y	E	D	K	R	V	N	V	F	I	E	D	A	S	K	F	L	E	.	.	N	V	T	N	T	Y	D	V	I	I	V	D	S	S	D	N	.	.	.	.	Q	N	F	Y	E	K	I	Y	N	A
Template Known Secondary structure			T	T									S																	G	G	G	G	S	T	T						S								.	.	T			S													.	.	.	.
Template Predicted Secondary structure																																																		.	.																	.	.	.	.
Template SS confidence
		99	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.			.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.					.	.	.	.	.	.	.	170	.	.
		752	.	.	.	.	.	.	.	760	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	P	S	L	V	L	I	G	F	S	A	H	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	K	P	N	G	Y	C	V	A	Q	C	E	S
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		182	.	.	.	.	.	.	.	190	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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