Job Description P39453 Confidence 80.33% Date Thu Jan 5 12:00:52 GMT 2012 Rank 250 Aligned Residues 139 % Identity 10% Template c2cnwF_ PDB info PDB header:signal recognition Chain: F: PDB Molecule:cell division protein ftsy; PDBTitle: gdpalf4 complex of the srp gtpases ffh and ftsy Resolution 2.39 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		631	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.				.	.	.	.	.	.	.	700	.	.	.	.	.	.	.
Predicted Secondary structure																																																																.	.	.
Query SS confidence																																																																.	.	.
Query Sequence		T	I	S	S	R	L	A	Q	A	M	G	G	E	L	S	A	T	S	T	P	E	V	G	S	C	F	C	L	R	L	P	L	R	V	A	T	A	P	V	P	K	T	V	N	Q	A	V	R	L	D	G	L	R	L	L	L	I	E	D	N	P	L	.	.	.	T	Q	R	I	T	I	E	M	L	K	T	S	G	A	Q
Query Conservation																																																																.	.	.
Alig confidence														.	.	.	.	.																																														.	.	.
Template Conservation														.	.	.	.	.
Template Sequence		A	V	K	E	K	L	V	G	M	L	E	P	.	.	.	.	.	P	V	E	P	K	G	R	V	V	L	V	V	G	V	N	G	V	G	K	T	T	T	I	A	K	L	G	R	Y	Y	Q	N	L	G	K	K	V	M	F	C	A	G	D	T	F	R	A	A	G	G	T	Q	L	S	E	W	G	K	R	L	S	I	P
Template Known Secondary structure											T			.	.	.	.	.					S	S	S							S	T	T	S	S														T	T	T											S	S	T	T													T
Template Predicted Secondary structure														.	.	.	.	.
Template SS confidence
		67	.	.	70	.	.	.	.	.	.	.	.						.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.
		708	.	710	.	.	.	.	.	.	.	.	.	720	.	.							.	.	.	.	.	.	.	730	.	.	.		.	.	.	.	.	.	740	.										.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770	.
Predicted Secondary structure																	.	.	.	.	.	.												.									.	.	.	.	.	.	.	.	.
Query SS confidence																	.	.	.	.	.	.												.									.	.	.	.	.	.	.	.	.
Query Sequence		I	V	A	V	G	N	A	A	Q	A	L	E	T	L	Q	.	.	.	.	.	.	N	S	E	P	F	A	A	A	L	V	D	.	F	D	L	P	D	I	D	G	.	.	.	.	.	.	.	.	.	I	T	L	A	R	Q	L	A	Q	Q	Y	P	S	L	V	L	I	G	F	S	A	H	V	I	D	E	T	L	R	Q
Query Conservation																	.	.	.	.	.	.												.									.	.	.	.	.	.	.	.	.
Alig confidence																	.	.	.	.	.	.												.									.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		V	I	Q	G	P	E	G	T	D	P	A	A	L	A	Y	D	A	V	Q	A	M	K	A	R	G	Y	D	L	L	F	V	D	T	A	G	R	L	H	T	K	H	N	L	M	E	E	L	K	K	V	K	R	A	I	A	K	A	D	P	E	E	P	K	E	V	W	L	V	L	D	A	V	T	G	Q	N	G	L	E	Q
Template Known Secondary structure							T	T	S																T	T		S											T	T																				T	T											T	T			T
Template Predicted Secondary structure
Template SS confidence
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.
		772	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	T	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	K	K
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		240	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions