Job Description P39453 Confidence 99.73% Date Thu Jan 5 12:00:52 GMT 2012 Rank 123 Aligned Residues 179 % Identity 16% Template c1zn2A_ PDB info PDB header:transcription regulator Chain: A: PDB Molecule:response regulatory protein; PDBTitle: low resolution structure of response regulator styr Resolution 2.91 Å

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		682	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	R	L	L	L	I	E	D	N	P	L	T	Q	R	I	T	I	E	M	L	K	T	S	G	A	Q	I	V	A	V	G	N	A	A	Q	A	L	E	T	L	Q	N	S	E	P	F	A	A	A	L	V	D	F	D	L	P	D	I	D	G	I	T	L	A	R	Q	L	A	Q	Q	Y	P	S	L	V	L	I	G	F	S
Query Conservation
Alig confidence																																															.
Template Conservation																																															.
Template Sequence		P	T	V	F	V	V	D	D	D	M	S	V	R	E	G	L	R	N	L	L	R	S	A	G	F	E	V	E	T	F	D	C	A	S	T	F	L	E	H	R	R	P	E	Q	H	.	G	C	L	V	L	D	M	R	M	P	G	M	S	G	I	E	L	Q	E	Q	L	T	A	I	S	D	G	I	P	I	V	F	I	T
Template Known Secondary structure									S														T	T	T							S	S										T	T	S		.							S	S		S	S	S												T	T
Template Predicted Secondary structure																																															.
Template SS confidence
		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.		50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
		762	.	.	.	.	.	.	.	770	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.																	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.
Predicted Secondary structure																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	H	V	I	D	E	T	L	R	Q	R	T	S	S	L	F	R	G	I	I	P	K	P	V	P	R	E	V	L	G	Q	L	L	A	H	Y	L	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	Q	V	N	N	D	Q	S	L	D	V	S	Q	L	N	E	D	A	Q	L	M	G	T	E	K	I
Query Conservation																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		A	H	G	D	I	P	M	T	V	R	A	M	K	A	G	A	I	E	F	L	P	K	P	F	E	E	Q	A	L	L	D	A	I	E	Q	G	L	Q	L	N	A	E	R	R	Q	A	R	E	T	Q	D	Q	L	E	Q	L	F	S	S	L	T	G	R	E	Q	Q	V	L	Q	L	T	I	R	G	L	M	N	K	Q	I
Template Known Secondary structure				S	S										T	T							S	S																																				T													T	T	T
Template Predicted Secondary structure
Template SS confidence
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.
		826	.	.	.	830	.	.	.	.	.	.	.	.	.	840	.	.	.	.	.	.	.	.	.	850	.	.	.	.	.	.	.	.	.	860	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	E	W	L	V	L	F	T	Q	H	A	L	P	L	L	D	E	I	D	I	A	R	A	S	Q	D	S	E	K	I	K	R	A	A	H	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	G	E	L	G	I	A	E	V	T	V	K	V	H	R	H	N	I	M	Q	K	L	N	V	R	S	L	A	N	L	V	H	L	V	E	K
Template Known Secondary structure			T	T	T																		T	T			S								T	T
Template Predicted Secondary structure
Template SS confidence
		164	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions