Job Description P39453 Confidence 100.00% Date Thu Jan 5 12:00:52 GMT 2012 Rank 5 Aligned Residues 271 % Identity 15% Template c1y8oA_ PDB info PDB header:transferase Chain: A: PDB Molecule:[pyruvate dehydrogenase [lipoamide]] kinase isozyme 3; PDBTitle: crystal structure of the pdk3-l2 complex Resolution 2.48 Å

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		415	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.									.	.	.	.	.	.	.	.	480	.	.	.	.	.	.
Predicted Secondary structure																																																											.	.	.	.	.	.	.	.
Query SS confidence																																																											.	.	.	.	.	.	.	.
Query Sequence		Q	V	K	A	R	T	A	E	L	Q	E	L	V	I	E	H	R	Q	A	R	A	E	A	E	K	A	S	Q	A	K	S	A	F	L	A	A	M	S	H	E	I	R	T	P	L	Y	G	I	L	G	T	A	Q	L	L	A	D	.	.	.	.	.	.	.	.	N	P	A	L	N	A	Q	R	D	D	L	R	A	I	T
Query Conservation																																																											.	.	.	.	.	.	.	.
Alig confidence																																																											.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		S	V	G	L	V	Q	S	W	Y	M	Q	S	F	L	E	L	L	E	Y	E	N	K	S	P	E	D	P	Q	V	L	D	N	F	L	Q	V	L	I	K	V	R	N	R	H	N	D	V	V	P	T	M	A	Q	G	V	I	E	Y	K	E	K	F	G	F	D	P	F	I	S	T	N	I	Q	Y	F	L	D	R	F	Y
Template Known Secondary structure																			G	G	G	G			T	T																			G	G	G
Template Predicted Secondary structure
Template SS confidence
		76	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.
		487	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.				.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.								540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.
Predicted Secondary structure																															.	.	.																									.	.	.	.	.	.	.
Query SS confidence																															.	.	.																									.	.	.	.	.	.	.
Query Sequence		D	S	G	E	S	L	L	T	I	L	N	D	I	L	D	Y	S	A	I	E	A	G	G	K	N	V	S	V	S	.	.	.	D	E	P	F	E	P	R	P	L	L	E	S	T	L	Q	L	M	S	G	R	V	K	G	R	.	.	.	.	.	.	.	P	I	R	L	A	T	A	I	A	D	D	M	P	C	A	L	M
Query Conservation																															.	.	.																									.	.	.	.	.	.	.
Alig confidence																															.	.	.																									.	.	.	.	.	.	.
Template Conservation
Template Sequence		T	N	R	I	S	F	R	M	L	I	N	Q	H	T	L	L	F	G	G	D	T	N	P	V	H	P	K	H	I	G	S	I	D	P	T	C	N	V	A	D	V	V	K	D	A	Y	E	T	A	K	M	L	C	E	Q	Y	Y	L	V	A	P	E	L	E	V	E	E	F	N	A	K	A	P	D	K	P	I	Q	V	V
Template Known Secondary structure																			S			S	S		S	S	T	T	S	B	T	T	B																										S												T	T	S	T	T	S
Template Predicted Secondary structure
Template SS confidence
		156	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.
		557	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.										.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.
Predicted Secondary structure																							.	.	.	.	.	.	.	.	.
Query SS confidence																							.	.	.	.	.	.	.	.	.
Query Sequence		G	D	P	R	R	I	R	Q	V	I	T	N	L	L	S	N	A	L	R	F	T	.	.	.	.	.	.	.	.	.	D	E	G	Y	I	I	L	R	S	R	T	D	G	E	Q	W	L	V	E	V	E	D	S	G	C	G	I	D	P	A	K	L	A	E	I	F	Q	P	F	V	Q	V	S	G	K	R	G	G	T	G
Query Conservation																							.	.	.	.	.	.	.	.	.
Alig confidence																							.	.	.	.	.	.	.	.	.																																											.	.	.	.	.
Template Conservation																																																																										.	.	.	.	.
Template Sequence		Y	V	P	S	H	L	F	H	M	L	F	E	L	F	K	N	S	M	R	A	T	V	E	L	Y	E	D	R	K	E	G	Y	P	A	V	K	T	L	V	T	L	G	K	E	D	L	S	I	K	I	S	D	L	G	G	G	V	P	L	R	K	I	D	R	L	F	N	Y	M	Y	S	P	.	.	.	.	.	L	F	G
Template Known Secondary structure																											T	T		S	S													S	S										S									G	G	G	G		T	T	T			.	.	.	.	.			T
Template Predicted Secondary structure																																																																										.	.	.	.	.
Template SS confidence
		236	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.						.	.	310
		628	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690
Predicted Secondary structure
Query SS confidence
Query Sequence		L	G	L	T	I	S	S	R	L	A	Q	A	M	G	G	E	L	S	A	T	S	T	P	E	V	G	S	C	F	C	L	R	L	P	L	R	V	A	T	A	P	V	P	K	T	V	N	Q	A	V	R	L	D	G	L	R	L	L	L	I	E	D	N
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Y	G	L	P	I	S	R	L	Y	A	R	Y	F	Q	G	D	L	K	L	Y	S	M	E	G	V	G	T	D	A	V	I	Y	L	K	A	L	S	S	E	S	F	E	R	L	P	V	F	N	K	S	A	W	R	H	Y	K	T	T	P	E	A	D	D
Template Known Secondary structure		T												T	T									T	T	T										S		G	G	G		B							S								S							S
Template Predicted Secondary structure
Template SS confidence
		326	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions