Job Description P39453 Confidence 46.15% Date Thu Jan 5 12:00:52 GMT 2012 Rank 392 Aligned Residues 52 % Identity 8% Template c1wa9A_ PDB info PDB header:circadian rhythm Chain: A: PDB Molecule:period circadian protein; PDBTitle: crystal structure of the pas repeat region of the2 drosophila clock protein period Resolution 3.15 Å

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		433	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	R	A	E	A	E	K	A	S	Q	A	K	S	A	F	L	A	A	M	S	H	E	I	R	T	P	L	Y	G	I	L	G	T	A	Q	L	L	A	D	N	P	A	L	N	A	Q	R	D	D	L	R	A	I	T	D	S	G	E	S	L	L	T	I	L	N	D	I
Query Conservation
Alig confidence																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		S	E	E	A	Q	S	R	N	T	R	I	K	E	D	I	V	K	R	L	A	E	T	V	S	R	P	S	D	T	V	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Q	E	V	S	R	R	C	Q	A	L	A	S	F	M	E	T	L	M	D	E	V
Template Known Secondary structure		G	G	G	S	T	T															S							T	T	S		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		516	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.																.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions