Job Description P39453 Confidence 60.50% Date Thu Jan 5 12:00:52 GMT 2012 Rank 319 Aligned Residues 107 % Identity 9% Template c1uwvA_ PDB info PDB header:transferase Chain: A: PDB Molecule:23s rrna (uracil-5-)-methyltransferase ruma; PDBTitle: crystal structure of ruma, the iron-sulfur cluster2 containing e. coli 23s ribosomal rna 5-methyluridine3 methyltransferase Resolution 1.95 Å

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		680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.			.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.		.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.
Predicted Secondary structure																														.	.																		.
Query SS confidence																														.	.																		.
Query Sequence		D	G	L	R	L	L	L	I	E	D	N	P	L	T	Q	R	I	T	I	E	M	L	K	T	S	G	A	Q	.	.	I	V	A	V	G	N	A	A	Q	A	L	E	T	L	Q	N	S	.	E	P	F	A	A	A	L	V	D	F	D	L	P	D	I	D	G	I	T	L	A	R	Q	L	A	Q	Q	Y	P	S	L	V
Query Conservation																														.	.																		.
Alig confidence																														.	.																		.																		.
Template Conservation																																																																			.
Template Sequence		Q	A	A	S	V	V	G	V	E	G	V	P	A	L	V	E	K	G	Q	Q	N	A	R	L	N	G	L	Q	N	V	T	F	Y	H	E	N	L	E	E	D	V	T	K	Q	P	W	A	K	N	G	F	D	K	V	L	L	D	P	A	R	A	G	A	A	G	.	V	X	Q	Q	I	I	K	L	E	P	I	R	I	V
Template Known Secondary structure		T	S	S							S															T	T			S								T	T	S			S	S	S	G	G	G	T	T			S								T	T					.											S
Template Predicted Secondary structure																																																																			.
Template SS confidence
		307	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.		.	.	.	.	.	.	.	.	380	.	.	.	.	.
		757	.	.	760	.	.	.	.	.	.	.	.	.	770	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	I	G	F	S	A	H	V	I	D	E	T	L	R	Q	R	T	S	S	L	F	R	G	I	I	P	K	P	V	P	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Y	V	S	C	N	P	A	T	L	A	R	D	S	E	A	L	L	K	A	G	Y	T	I	A	R	L	A	X	L	D	X
Template Known Secondary structure					S															T	T
Template Predicted Secondary structure
Template SS confidence
		386	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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