Job Description P39453 Confidence 97.66% Date Thu Jan 5 12:00:52 GMT 2012 Rank 174 Aligned Residues 127 % Identity 21% Template c1kijB_ PDB info PDB header:isomerase Chain: B: PDB Molecule:dna gyrase subunit b; PDBTitle: crystal structure of the 43k atpase domain of thermus thermophilus2 gyrase b in complex with novobiocin Resolution 2.30 Å

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		552	.	.	.	.	.	.			.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.				.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.									.	610	.	.	.	.	.	.	.	.
Predicted Secondary structure									.	.																				.	.	.																																.	.	.	.	.	.	.	.
Query SS confidence									.	.																				.	.	.																																.	.	.	.	.	.	.	.
Query Sequence		P	C	A	L	M	G	D	.	.	P	R	R	I	R	Q	V	I	T	N	L	L	S	N	A	L	R	F	T	.	.	.	D	E	G	Y	I	I	L	R	S	R	T	D	G	E	Q	W	L	V	E	V	E	D	S	G	C	G	I	D	P	A	K	.	.	.	.	.	.	.	.	L	A	E	I	F	Q	P	F	V	Q
Query Conservation									.	.																				.	.	.																																.	.	.	.	.	.	.	.
Alig confidence									.	.																				.	.	.															.	.	.															.	.	.	.	.	.	.	.
Template Conservation																																															.	.	.
Template Sequence		P	A	M	Y	I	G	G	T	G	V	E	G	Y	H	H	L	F	K	E	I	L	D	N	A	V	D	E	A	L	A	G	Y	A	T	E	I	L	V	R	L	N	E	D	G	S	.	.	.	L	T	V	E	D	N	G	R	G	I	P	V	D	L	M	P	E	E	G	K	P	A	V	E	V	I	Y	N	T	L	H	S
Template Known Secondary structure		T					S		S	S																					T	T	S										T	T	S		.	.	.						S	S						S			T	T	T	T										S	S
Template Predicted Secondary structure																																															.	.	.
Template SS confidence
		23	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.				.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.
		619	620									.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.
Predicted Secondary structure				.	.	.	.	.	.	.	.
Query SS confidence				.	.	.	.	.	.	.	.
Query Sequence		V	S	.	.	.	.	.	.	.	.	G	K	R	G	G	T	G	L	G	L	T	I	S	S	R	L	A	Q	A	M	G	G	E	L	S	A	T	S	T	P	E	V	G	S	C	F	C	L	R	L	P	L	R	V	A	T	A	P	V	P	K	T	V	N	Q	A	V	R	L	D	G	L	R	L	L	L
Query Conservation				.	.	.	.	.	.	.	.
Alig confidence				.	.	.	.	.	.	.	.																	.	.	.	.	.
Template Conservation																												.	.	.	.	.
Template Sequence		G	G	K	F	E	Q	G	A	Y	K	V	S	G	G	L	H	G	V	G	A	S	V	V	N	A	L	.	.	.	.	.	S	E	W	T	V	V	E	V	F	R	E	G	K	H	H	R	I	A	F	S	R	G	E	V	T	E	P	L	R	V	V	G	E	A	P	R	G	K	T	G	T	R	V	T	F
Template Known Secondary structure			S	G	G	G	S	S	S					S		S	S	T	T	S							T	.	.	.	.	.											T	T									T	T														S	S
Template Predicted Secondary structure																												.	.	.	.	.
Template SS confidence
		100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.						.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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