Job Description P39453 Confidence 96.92% Date Thu Jan 5 12:00:52 GMT 2012 Rank 188 Aligned Residues 80 % Identity 24% Template c1ea6A_ PDB info PDB header:dna repair Chain: A: PDB Molecule:pms1 protein homolog 2; PDBTitle: n-terminal 40kda fragment of nhpms2 complexed with adp Resolution 2.7 Å

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		561	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640
Predicted Secondary structure
Query SS confidence
Query Sequence		R	I	R	Q	V	I	T	N	L	L	S	N	A	L	R	F	T	D	E	G	Y	I	I	L	R	S	R	T	D	G	E	Q	W	L	V	E	V	E	D	S	G	C	G	I	D	P	A	K	L	A	E	I	F	Q	P	F	V	Q	V	S	G	K	R	G	G	T	G	L	G	L	T	I	S	S	R	L	A	Q	A	M
Query Conservation
Alig confidence																					.													.																		.	.	.	.	.	.	.	.	.	.	.	.	.														.	.	.	.
Template Conservation																					.													.																		.	.	.	.	.	.	.	.	.	.	.	.	.														.	.	.	.
Template Sequence		S	L	S	T	A	V	K	E	L	V	E	N	S	L	D	A	G	A	T	.	N	I	D	L	K	L	K	D	Y	G	V	D	.	L	I	E	V	S	D	N	G	C	G	V	E	E	E	N	F	E	.	.	.	.	.	.	.	.	.	.	.	.	.	G	L	T	L	E	A	L	S	S	L	C	A	L	.	.	.	.
Template Known Secondary structure		S															T	T		S	.								T	T	T	T	S	.								S					T	T	S	T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	T	T	T											.	.	.	.
Template Predicted Secondary structure																					.													.																		.	.	.	.	.	.	.	.	.	.	.	.	.														.	.	.	.
Template SS confidence
		34	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.		.	.	.	.	.	.	.	60	.	.	.	.		.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.														.	.	.	.	.	.	.	.	90	.	.	.	.
		641	.	.	.	.	.	.	.	.		650	.	.	.	.	.	.	.	.	.	660
Predicted Secondary structure											.
Query SS confidence											.
Query Sequence		G	G	E	L	S	A	T	S	T	.	P	E	V	G	S	C	F	C	L	R	L
Query Conservation											.
Alig confidence		.									.
Template Conservation		.
Template Sequence		.	S	D	V	T	I	S	T	C	H	A	S	A	K	V	G	T	R	L	M	F
Template Known Secondary structure		.	S									T	T		S	S
Template Predicted Secondary structure		.
Template SS confidence
			118	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions