Return to main results Retrieve Phyre Job Id

Job DescriptionP16678
Confidence98.35%DateThu Jan 5 11:35:22 GMT 2012
Rank98Aligned Residues167
% Identity14%Templated1yrba1
SCOP infoP-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases Nitrogenase iron protein-like
Resolution1.75

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   33......40.........50.........60.........70.........80.........90.........100.........110..
Predicted Secondary structure 






































Query SS confidence 















































































Query Sequence  VLGIVGESGSGKTTLLKSISARLTPQQGEIHYENRSLYAMSEADRRRLLRTEWGVVHQHPLDGLRRQVSAGGNIGERLMA
Query Conservation     
 
 








  
 
   
  
 
   
  
               
    
          
           
Alig confidence 























































.....


















Template Conservation 

 


  







  
            

 
                     .....                   
Template Sequence  IVVFVGTAGSGKTTLTGEFGRYLEDNYKVAYVNLDTGVKELPYEPSIDVREFVTVE. . . . . EIMREGYGPNGAIVESYDR
Template Known Secondary structure 
STTSSTTTS


SS
S

SS

SGGGT

.....TTT

Template Predicted Secondary structure 























.....







Template SS confidence 















































































   2.......10.........20.........30.........40.........50....... ..60.........70......
 
   113......120.........130.........140.........150.........160.........170.........180.........190..
Predicted Secondary structure 






























Query SS confidence 















































































Query Sequence  TGARHYGDIRATAQKWLEEVEIPANRIDDLPTTFSGGMQQRLQIARNLVTHPKLVFMDEPTGGLDVSVQARLLDLLRGLV
Query Conservation                  
    
           

 

  

 




   
 






  


      
   
  
 
Alig confidence 


.

















..























































Template Conservation     .                  ..      
                       
 
                       
Template Sequence  LME. KFNEYLNKILRLEKENDY. . VLIDTPGQMETFLFHEFGVRLMENLPYPLVVYISDPEILKKPNDYCFVRFFALLID
Template Known Secondary structure  T.T
S..

SSSTSSS

GGG

S
Template Predicted Secondary structure  .





..
















Template SS confidence 















































































   77.. 80.........90....... ..100.........110.........120.........130.........140.........150...
 
   193......200.......
Predicted Secondary structure 




Query SS confidence 














Query Sequence  VELNLAVVIVTHDLG
Query Conservation       


 


   
Alig confidence 














Template Conservation         
 
 

 
Template Sequence  LRLGATTIPALNKVD
Template Known Secondary structure  TS


GG
Template Predicted Secondary structure 







Template SS confidence 














   154.....160........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions