Job Description P16678 Confidence 97.66% Date Thu Jan 5 11:35:22 GMT 2012 Rank 124 Aligned Residues 148 % Identity 18% Template d1ubea1 SCOP info P-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases RecA protein-like (ATPase-domain) Resolution 3.30

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		28	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	W	P	G	E	V	L	G	I	V	G	E	S	G	S	G	K	T	T	L	L	K	S	I	S	A	R	L	T	P	Q	Q	G	E	I	H	Y	E	N	R	S	L	Y	A	M	S	E	A	D	R	R	R	L	L	R	T	E	W	G	V	V	H	Q	H	P	L	D	G	L	R	R	Q	V	S	A	G	G	N	I	G
Query Conservation
Alig confidence																																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	P	R	G	R	V	I	E	I	Y	G	P	E	S	S	G	K	T	T	V	A	L	H	A	V	A	N	A	Q	A	A	G	G	I	A	A	F	I	D	A	E	H	A	L	D	P	E	Y	A	K	K	L	G	V	D	T	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure		B		T	T	S							S	T	T	S	S															T	S								S	S												T			G	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		58	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.
		108	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.									.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																		.	.	.	.	.	.	.	.
Query SS confidence																																																																		.	.	.	.	.	.	.	.
Query Sequence		E	R	L	M	A	T	G	A	R	H	Y	G	D	I	R	A	T	A	Q	K	W	L	E	E	V	E	I	P	A	N	R	I	D	D	L	P	T	T	F	S	G	G	M	Q	Q	R	L	Q	I	A	R	N	L	V	T	H	P	K	L	V	F	M	D	E	.	.	.	.	.	.	.	.	P	T	G	G	L	D	V	S
Query Conservation																																																																		.	.	.	.	.	.	.	.
Alig confidence		.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.	.	.	.	.	.	.	.
Template Conservation		.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	S	L	L	V	S	Q	P	D	T	G	E	Q	A	L	E	I	A	D	M	L	V	R	S	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	L	D	I	I	V	I	D	S	V	A	A	L	V	P	R	A	E	I	E	G	L	Q	A	R
Template Known Secondary structure		.	G							S	S								T						T	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								S		S	T	T
Template Predicted Secondary structure		.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
			115	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.																															.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.
		180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.		.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																												.
Query SS confidence																												.
Query Sequence		V	Q	A	R	L	L	D	L	L	R	G	L	V	V	E	L	N	L	A	V	V	I	V	T	H	D	.	L	G	V	A	R	L	L	A	D	R	L	L	V	M	K	Q	G	Q	V	V	E	S	G	L
Query Conservation																												.
Alig confidence																												.
Template Conservation
Template Sequence		L	M	S	Q	A	L	R	K	M	T	G	A	L	N	N	S	G	T	T	A	I	F	I	N	Q	T	G	G	K	A	L	K	F	Y	A	S	V	R	L	D	V	R	R	I	E	T	L	K	D	G	T
Template Known Secondary structure																														T	T						S														S	S
Template Predicted Secondary structure
Template SS confidence
		172	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions