Return to main results Retrieve Phyre Job Id

Job DescriptionP16678
Confidence100.00%DateThu Jan 5 11:35:22 GMT 2012
Rank44Aligned Residues220
% Identity26%Templated1pf4a1
SCOP infoP-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases ABC transporter ATPase domain-like
Resolution3.80

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   3......10..... ....20.........30.........40.........50.........60.........70.........80
Predicted Secondary structure 

..






























Query SS confidence 












. .
































































Query Sequence  QPLLSVNNLTHLY. . APGKGFSDVSFDLWPGEVLGIVGESGSGKTTLLKSISARLTPQQGEIHYENRSLYAMSEADRRRL
Query Conservation   
 
   

    ..    

  


 
  

   
 
 








  
 
   
  
 
   
  
           
Alig confidence 












..




























































....
Template Conservation     
   


         

  


 
  

   
 
 








  
 
      
 
   
          ....
Template Sequence  NGEVDVKDVTFTYQGKEKPALSHVSFSIPQGKTVALVGRSGSGKSTIANLFTRFYDVDSGSICLDGHDVRDYKLTN. . . .
Template Known Secondary structure 
SS
SS

TT





TT






S
SSTSSSS

SSS








SSTTS....
Template Predicted Secondary structure 



























....
Template SS confidence 















































































   339340.........350.........360.........370.........380.........390.........400.........410....
 
   81........90.........100.........110.........120.........130... ......140.........150......
Predicted Secondary structure 






















....











Query SS confidence 




















































. . . .






















Query Sequence  LRTEWGVVHQHPLDGLRRQVSAGGNIGERLMATGARHYGDIRATAQKWLEEVE. . . . IPANRIDDLPTTFSGGMQQRLQI
Query Conservation      
    
          
                           
    ....
           

 

  

 
Alig confidence 












...




































....






















Template Conservation      
  
 
   ...
   

 


                                
          

 
  


 
Template Sequence  LRRHFALVSQNVH. . . LFNDTIANNIAYAAEGEYTREQIEQAARQAHAMEFIENMPQGLDTVIGENGTSLSGGQRQRVAI
Template Known Secondary structure 


B


S

...

SS
TTTSS



GGGGGGSS

SS

TT
Template Predicted Secondary structure 




...


























Template SS confidence 















































































   415....420....... ..430.........440.........450.........460.........470.........480.........490.
 
   157..160.........170.........180.........190.........200.........210.........220.........230..
Predicted Secondary structure 






















Query SS confidence 











































































Query Sequence  ARNLVTHPKLVFMDEPTGGLDVSVQARLLDLLRGLVVELNLAVVIVTHDLGVARLLADRLLVMKQGQVVESGLTDR
Query Conservation 



   
 






  


      
   
  
      


 


       
 
 
  
  
 
   
   
Alig confidence 


































..















.





















Template Conservation 



   
 







 


      
   
   ..    


 


     .   
 
  
  
 

  
   
Template Sequence  ARALLRDAPVLILDEATSALDTESERAIQAALDEL. . QKNKTVLVIAHRLSTI. EQADEILVVDEGEIIERGRHAD
Template Known Secondary structure  TTB
S
S



S


TT..
SS





S


GGG.G



SS
SSS


Template Predicted Secondary structure 









..




.








Template SS confidence 











































































   492.......500.........510.........520...... ...530.........540.. .......550.........560....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions