Job Description P16678 Confidence 96.27% Date Thu Jan 5 11:35:22 GMT 2012 Rank 341 Aligned Residues 149 % Identity 9% Template c3pqcA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:probable gtp-binding protein engb; PDBTitle: crystal structure of thermotoga maritima ribosome biogenesis gtp-2 binding protein engb (ysxc/yiha) in complex with gdp Resolution 1.90 Å

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		33	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.		.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.
Predicted Secondary structure																								.
Query SS confidence																								.
Query Sequence		V	L	G	I	V	G	E	S	G	S	G	K	T	T	L	L	K	S	I	S	A	R	.	L	T	P	Q	Q	G	E	I	H	Y	E	N	R	S	L	Y	A	M	S	E	A	D	R	R	R	L	L	R	T	E	W	G	V	V	H	Q	H	P	L	D	G	L	R	R	Q	V	S	A	G	G	N	I	G	E	R	L	M
Query Conservation																								.
Alig confidence																								.																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		E	V	A	F	V	G	R	S	N	V	G	K	S	S	L	L	N	A	L	F	N	R	K	I	A	F	V	S	K	T	P	G	K	T	R	S	I	N	F	Y	L	V	N	S	K	Y	Y	F	V	D	L	P	G	Y	G	Y	A	K	V	S	K	K	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure								B	T	T	S	S										T	S			S				S	S													T	T	T									B	S	S	S							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		25	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.
		112	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	T	G	A	R	H	Y	G	D	I	R	A	T	A	Q	K	W	L	E	E	V	E	I	P	A	N	R	I	D	D	L	P	T	T	F	S	G	G	M	Q	Q	R	L	Q	I	A	R	N	L	V	T	H	P	K	L	V	F	M	D	E	P	T	G	G	L	D	V	S	V	Q	A	R	L	L	D	L	L	R	G	L
Query Conservation
Alig confidence		.	.	.	.	.
Template Conservation		.	.	.	.	.
Template Sequence		.	.	.	.	.	R	M	L	W	K	R	L	V	E	D	Y	F	K	N	R	W	S	L	Q	M	V	F	L	L	V	D	G	R	I	P	P	Q	D	S	D	L	M	M	V	E	W	M	K	S	L	N	I	P	F	T	I	V	L	T	K	M	D	K	V	K	M	S	E	R	A	K	K	L	E	E	H	R	K	V	F
Template Known Secondary structure		.	.	.	.	.																T	T										T	T	S																T	T										G	G	G	S		G	G	G
Template Predicted Secondary structure		.	.	.	.	.
Template SS confidence
							88	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
		192	.	.	.	.	.	.	.	200	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	V	E	L	N	L	A	V	V	I	V	T
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	K	Y	G	E	Y	T	I	I	P	T	S
Template Known Secondary structure			S	S			S
Template Predicted Secondary structure
Template SS confidence
		163	.	.	.	.	.	.	170	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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