Job Description P16678 Confidence 97.83% Date Thu Jan 5 11:35:22 GMT 2012 Rank 117 Aligned Residues 162 % Identity 17% Template c2qthA_ PDB info PDB header:nucleotide binding protein Chain: A: PDB Molecule:gtp-binding protein; PDBTitle: crystal structure of a gtp-binding protein from the2 hyperthermophilic archaeon sulfolobus solfataricus in3 complex with gdp Resolution 2.00 Å

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		33	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	L	G	I	V	G	E	S	G	S	G	K	T	T	L	L	K	S	I	S	A	R	L	T	P	Q	Q	G	E	I	H	Y	E	N	R	S	L	Y	A	M	S	E	A	D	R	R	R	L	L	R	T	E	W	G	V	V	H	Q	H	P	L	D	G	L	R	R	Q	V	S	A	G	G	N	I	G	E	R	L	M	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	I	G	I	V	G	Y	T	N	S	G	K	T	S	L	F	N	S	L	T	G	L	M	S	P	K	R	Y	A	I	P	I	N	N	R	K	I	M	L	V	D	T	V	G	F	I	R	G	I	P	P	Q	I	V	D	A	F	F	V	T	L	S	E	A	K	Y	S	D	A	L	I	L	V	I	D	S	T	F	S	E
Template Known Secondary structure								B	T	T	S	S										T				S								T	T											B		S	S			G	G	G										G	G	G	G	S	S								T	T	S
Template Predicted Secondary structure
Template SS confidence
		181	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260
		113	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.		.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.
Predicted Secondary structure																																																													.
Query SS confidence																																																													.
Query Sequence		T	G	A	R	H	Y	G	D	I	R	A	T	A	Q	K	W	L	E	E	V	E	I	P	A	N	R	I	D	D	L	P	T	T	F	S	G	G	M	Q	Q	R	L	Q	I	A	R	N	L	V	T	H	P	K	L	V	F	M	D	E	.	P	T	G	G	L	D	V	S	V	Q	A	R	L	L	D	L	L	R	G	L
Query Conservation																																																													.
Alig confidence																																																													.
Template Conservation
Template Sequence		N	L	L	I	E	T	L	Q	S	S	F	E	I	L	R	E	I	G	V	S	G	K	P	I	L	V	T	L	N	K	I	D	K	I	N	G	D	L	Y	K	K	L	D	L	V	E	K	L	S	K	E	L	Y	S	P	I	F	D	V	I	P	I	S	A	L	K	R	T	N	L	E	L	L	R	D	K	I	Y	Q	L
Template Known Secondary structure																			T			S										G	G	G			S																		S									B	T	T	T	T	B	S
Template Predicted Secondary structure
Template SS confidence
		272	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.
		192	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	V	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	T	Q
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		352	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions