Job Description P16678 Confidence 100.00% Date Thu Jan 5 11:35:22 GMT 2012 Rank 50 Aligned Residues 213 % Identity 23% Template c2ghiD_ PDB info PDB header:transport protein Chain: D: PDB Molecule:transport protein; PDBTitle: crystal structure of plasmodium yoelii multidrug resistance2 protein 2 Resolution 2.20 Å

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		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	S	V	N	N	L	T	H	L	Y	A	P	G	K	G	F	S	D	V	S	F	D	L	W	P	G	E	V	L	G	I	V	G	E	S	G	S	G	K	T	T	L	L	K	S	I	S	A	R	L	T	P	Q	Q	G	E	I	H	Y	E	N	R	S	L	Y	A	M	S	E	A	D	R	R	R	L	L	R	T	E	W
Query Conservation
Alig confidence														.	.																																								.																		.	.	.	.
Template Conservation														.	.																																								.																		.	.	.	.
Template Sequence		I	E	F	S	D	V	N	F	S	Y	H	R	.	.	T	L	K	S	I	N	F	F	I	P	S	G	T	T	C	A	L	V	G	H	T	G	S	G	K	S	T	I	A	K	L	L	Y	R	F	Y	D	A	E	.	G	D	I	K	I	G	G	K	N	V	N	K	Y	N	R	N	S	.	.	.	.	I	R	S	I	I
Template Known Secondary structure														.	.	S										T	T								S	T	T	S	S									T	T	S	S				.						T	T			G	G	G	S					.	.	.	.			T	T
Template Predicted Secondary structure														.	.																																								.																		.	.	.	.
Template SS confidence
		18	.	20	.	.	.	.	.	.	.	.	.			30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.		.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.					.	.	.	.	90
		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.		.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.
Predicted Secondary structure																																																											.
Query SS confidence																																																											.
Query Sequence		G	V	V	H	Q	H	P	L	D	G	L	R	R	Q	V	S	A	G	G	N	I	G	E	R	L	M	A	T	G	A	R	H	Y	G	D	I	R	A	T	A	Q	K	W	L	E	E	V	E	I	P	A	N	R	I	D	D	L	.	P	T	T	F	S	G	G	M	Q	Q	R	L	Q	I	A	R	N	L	V	T	H	P
Query Conservation																																																											.
Alig confidence										.	.	.														.	.	.	.																														.
Template Conservation										.	.	.														.	.	.	.
Template Sequence		G	I	V	P	Q	D	T	I	.	.	.	L	F	N	E	T	I	K	Y	N	I	L	Y	G	.	.	.	.	K	L	D	A	T	D	E	E	V	I	K	A	T	K	S	A	Q	L	Y	D	F	I	E	A	L	P	K	K	W	D	T	I	V	L	S	G	G	E	R	Q	R	I	A	I	A	R	C	L	L	K	D	P
Template Known Secondary structure						S	S			.	.	.			S	S	B							T	T	.	.	.	.	S	T	T													T	T								S	T	T	G	G	G		B																		T
Template Predicted Secondary structure										.	.	.														.	.	.	.
Template SS confidence
		96	.	.	.	100	.	.	.				.	.	.	.	.	.	110	.	.	.	.	.	.					.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.
		165	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	L	V	F	M	D	E	P	T	G	G	L	D	V	S	V	Q	A	R	L	L	D	L	L	R	G	L	V	V	E	L	N	L	A	V	V	I	V	T	H	D	L	G	V	A	R	L	L	A	D	R	L	L	V	M	K	Q	G	Q	V	V	E	S	G	L	T	D	R	V	L	D	D	P	H	H	P	Y	T	Q	L
Query Conservation
Alig confidence														.	.	.	.	.	.	.	.	.	.	.																							.																												.
Template Conservation														.	.	.	.	.	.	.	.	.	.	.																							.																												.
Template Sequence		K	I	V	I	F	D	D	S	K	T	E	Y	.	.	.	.	.	.	.	.	.	.	.	L	F	Q	K	A	V	E	D	N	R	T	L	I	I	I	A	H	R	L	S	T	I	.	S	S	A	E	S	I	I	L	L	N	K	G	K	I	V	E	K	G	T	H	K	D	L	L	K	L	N	.	G	E	Y	A	E	M
Template Known Secondary structure		S												.	.	.	.	.	.	.	.	.	.	.																	S	S	G	G	G	S	.	T	T		S							T	T															T	.	S
Template Predicted Secondary structure														.	.	.	.	.	.	.	.	.	.	.																							.																												.
Template SS confidence
		175	.	.	.	.	180	.	.	.	.	.	.												.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.		.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.		.	.	.	.	240	.
		245
Predicted Secondary structure
Query SS confidence
Query Sequence		L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		W
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		251

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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