Job Description P16678 Confidence 97.95% Date Thu Jan 5 11:35:22 GMT 2012 Rank 109 Aligned Residues 138 % Identity 17% Template c1xp8A_ PDB info PDB header:dna binding protein Chain: A: PDB Molecule:reca protein; PDBTitle: "deinococcus radiodurans reca in complex with atp-gamma-s" Resolution 2.50 Å

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		28	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.		.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.
Predicted Secondary structure																						.
Query SS confidence																						.
Query Sequence		L	W	P	G	E	V	L	G	I	V	G	E	S	G	S	G	K	T	T	L	.	L	K	S	I	S	A	R	L	T	P	Q	Q	G	E	I	H	Y	E	N	R	S	L	Y	A	M	S	E	A	D	R	R	R	L	L	R	T	E	W	G	V	V	H	Q	H	P	L	D	G	L	R	R	Q	V	S	A	G	G	N	I
Query Conservation																						.
Alig confidence																						.																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		I	P	R	G	R	I	T	E	I	Y	G	P	E	S	G	G	K	T	T	L	A	L	A	I	V	A	Q	A	Q	K	A	G	G	T	C	A	F	I	D	A	E	H	A	L	D	P	V	Y	A	R	A	L	G	V	N	T	D	E	L	L	V	S	Q	P	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure				T	T	S							S	T	T	S	S															T	T								S	S											T	T			G	G	G							S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		68	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.
		107	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170									.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																		.	.	.	.	.	.	.	.
Query SS confidence																																																																		.	.	.	.	.	.	.	.
Query Sequence		G	E	R	L	M	A	T	G	A	R	H	Y	G	D	I	R	A	T	A	Q	K	W	L	E	E	V	E	I	P	A	N	R	I	D	D	L	P	T	T	F	S	G	G	M	Q	Q	R	L	Q	I	A	R	N	L	V	T	H	P	K	L	V	F	M	D	.	.	.	.	.	.	.	.	E	P	T	G	G	L	D	V
Query Conservation																																																																		.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	N	G	E	Q	A	L	E	I	M	E	L	L	V	R	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	A	I	D	V	V	V	V	D	S	V	A	A	L	T	P	R	A	E	I	P	G	L	Q	A
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	S													T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T			S							T	T	T				S	T	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
												133	.	.	.	.	.	.	140	.	.	.	.	.	.	.																															.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.
		179	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.		.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220
Predicted Secondary structure																												.
Query SS confidence																												.
Query Sequence		S	V	Q	A	R	L	L	D	L	L	R	G	L	V	V	E	L	N	L	A	V	V	I	V	T	H	.	D	L	G	V	A	R	L	L	A	D	R	L	L	V	M	K
Query Conservation																												.
Alig confidence																												.
Template Conservation
Template Sequence		R	L	M	S	Q	A	L	R	K	L	T	A	I	L	S	K	T	G	T	A	A	I	F	I	N	Q	V	G	G	R	A	L	K	F	Y	A	S	V	R	L	D	V	R
Template Known Secondary structure																T	T	T																				S
Template Predicted Secondary structure
Template SS confidence
		181	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions