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Job DescriptionP16678
Confidence99.64%DateThu Jan 5 11:35:22 GMT 2012
Rank69Aligned Residues90
% Identity21%Templatec1xexB_
PDB info PDB header:cell cycleChain: B: PDB Molecule:smc protein; PDBTitle: structural biochemistry of atp-driven dimerization and dna2 stimulated activation of smc atpases.
Resolution2.50 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   141........150.........160 .........170.........180.........190.........200.........210......
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Query Sequence  DLPTTFSGGMQQRLQIARNL. . . . VTHPKLVFMDEPTGGLDVSVQARLLDLLRGLVVELNLAVVIVTHDLGVARLLADRL
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Template Sequence  KRIEAMSGGEKALTALAFVFAIQKFKPAPFYLFDQIDAHLDDANVKRVADLIKESSKE. . SQFIVITLRDVMMAN. ADKI
Template Known Secondary structure  GGGS
S

SSS
SS

TTT..S
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   1064.....1070.........1080.........1090.........1100.........1110.........1120. ........1130...... ...1140
 
   217 ..220.. .......230...
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Query Sequence  L. . VMKQG. . QVVESGLTDRV
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Template Sequence  IGVSMRDGVSKVVSLSLEKAM
Template Known Secondary structure  TT
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   1141........1150.........1160.
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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