Job Description P16678 Confidence 99.49% Date Thu Jan 5 11:35:22 GMT 2012 Rank 73 Aligned Residues 81 % Identity 28% Template c1ii8B_ PDB info PDB header:replication Chain: B: PDB Molecule:rad50 abc-atpase; PDBTitle: crystal structure of the p. furiosus rad50 atpase domain Resolution 3.02 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.							.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.
Predicted Secondary structure																				.	.	.	.	.	.
Query SS confidence																				.	.	.	.	.	.
Query Sequence		D	D	L	P	T	T	F	S	G	G	M	Q	Q	R	L	Q	I	A	.	.	.	.	.	.	R	N	L	V	T	H	P	K	L	V	F	M	D	E	P	T	G	G	L	D	V	S	V	Q	A	R	L	L	D	L	L	R	G	L	V	V	E	L	N	L	A	V	V	I	V	T	H	D	L	G	V	A	R	L	L	A
Query Conservation																				.	.	.	.	.	.
Alig confidence																				.	.	.	.	.	.																																						.															.
Template Conservation																																																															.															.
Template Sequence		E	R	P	L	T	F	L	S	G	G	E	R	I	A	L	G	L	A	F	R	L	A	M	S	L	Y	L	A	G	E	I	S	L	L	I	L	D	E	P	T	P	Y	L	D	E	E	R	R	R	K	L	I	T	I	M	E	R	Y	L	K	K	.	I	P	Q	V	I	L	V	S	H	D	E	E	L	K	.	D	A	A
Template Known Secondary structure					G	G	G	S																						S	S		S								S	S	S	S		S													T	G	G	G	.	S	S							S		G	G	G	G	.	G	T	S
Template Predicted Secondary structure																																																															.															.
Template SS confidence
		786	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840	.	.	.	.	.	.		.	.	.	850	.	.	.	.	.	.	.	.	.	860		.	.	.
		214	.	.			.	.	.	220	.	.
Predicted Secondary structure					.	.
Query SS confidence					.	.
Query Sequence		D	R	L	.	.	L	V	M	K	Q	G
Query Conservation					.	.
Alig confidence					.	.
Template Conservation
Template Sequence		D	H	V	I	R	I	S	L	E	N	G
Template Known Secondary structure		S									S	S
Template Predicted Secondary structure
Template SS confidence
		864	.	.	.	.	.	870	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions