Job Description P45799 Confidence 95.46% Date Thu Jan 5 12:03:47 GMT 2012 Rank 83 Aligned Residues 64 % Identity 16% Template c3p5tE_ PDB info PDB header:rna binding protein Chain: E: PDB Molecule:cleavage and polyadenylation specificity factor subunit 5; PDBTitle: cfim25-cfim68 complex Resolution 2.70 Å

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		46	.	.	.	50	.	.	.	.	.	.	.	.			.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.			.	.	.	.	.	.	110	.	.	.	.
Predicted Secondary structure															.	.																																														.	.
Query SS confidence															.	.																																														.	.
Query Sequence		N	R	E	A	V	M	I	V	P	I	V	D	D	.	.	H	L	I	L	I	R	E	Y	A	V	G	T	E	S	Y	E	L	G	F	S	K	G	L	I	D	P	G	E	S	V	Y	E	A	A	N	R	E	L	K	E	E	V	G	F	G	.	.	A	N	D	L	T	F	L	K	K	L	S
Query Conservation															.	.																																														.	.
Alig confidence															.	.								.	.	.	.	.																																		.	.
Template Conservation																								.	.	.	.	.
Template Sequence		R	T	V	E	G	V	L	I	V	H	E	H	R	L	P	H	V	L	L	L	Q	L	.	.	.	.	.	G	T	T	F	F	K	L	P	G	G	E	L	N	P	G	E	D	E	V	E	G	L	K	R	L	M	T	E	I	L	G	V	L	Q	D	W	V	I	D	D	C	I	G	N	W	W
Template Known Secondary structure													T	T										.	.	.	.	.	T	T	T					S						T	T
Template Predicted Secondary structure																								.	.	.	.	.
Template SS confidence
		78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.						100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions